PlantSME Plant secondary metabolism enzyme database

Gollania philippinensis (gollania_philippinensis)

Imported from atlas release summary for Gollania philippinensis.

632
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Algae
Site group 29
Bryophytes
Current group 125
Lycophytes/Ferns
Site group 4
Gymnosperms
Site group 6
Basal angiosperms
Site group 13
Monocots
Site group 117
Eudicots
Site group 495
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
Phenylpropanoid pathway 26.58% Terpenoid pathway 23.89% Alkaloid pathway 19.62% Rosmarinic acid pathway 11.71% Flavonoid pathway 11.55% Steroid pathway 6.65%
Family Distribution
C3'H/CYP98A 6.77% C4H 6.65% POD 5.34% BAHD 5.17% CYP76 4.99% 4CL 4.45% IFS 4.04% NMT 3.56%
Other Families 59.03%
More Families (95)
BR6OX2/CYP85A2 43 2.55% PAL 42 2.49% DWF4/CYP90B1 41 2.43% IFR 40 2.38% F3'H/CYP75B 39 2.32% IO 38 2.26% T3O 35 2.08% GS 34 2.02% STR 34 2.02% F3H 33 1.96% PYKS 24 1.43% UFGT 23 1.37% UGT 23 1.37% TRI/TRII 21 1.25% CAS 21 1.25% 7DLGT 20 1.19% CAD 20 1.19% CODM/T6ODM 19 1.13% SMT1/SMT2/SMT3 19 1.13% CYP71 19 1.13% 7DLH 17 1.01% CYP90D1 16 0.95% H6H 15 0.89% CHS 15 0.89% CSE 15 0.89% COMT 15 0.89% F3'5'H/CYP75A 13 0.77% G8O/G8H 12 0.71% CYP80B1 12 0.71% SLS 11 0.65% NCS 11 0.65% LAMT 10 0.59% SGD 10 0.59% RAS 10 0.59% T16H 9 0.53% 8HGO 9 0.53% HCT 9 0.53% 16OMT 8 0.48% LAC 8 0.48% CPD/CYP90A1 8 0.48% COR 7 0.42% GES 7 0.42% FNS 7 0.42% CNMT 6 0.36% ANR 6 0.36% CCR 6 0.36% CPR 6 0.36% SQS/FDFT1 6 0.36% BR6OX1/CYP85A1 6 0.36% ROT3/CYP90C1 6 0.36% TPS 6 0.36% PMT 5 0.3% BBE 5 0.3% AACT 5 0.3% GGPPS 5 0.3% TDC 4 0.24% CHI 4 0.24% F5H/CYP84A 4 0.24% DWF5 4 0.24% SMO1/SMO2 4 0.24% MVK 4 0.24% MPO 3 0.18% TYDC_DDC 3 0.18% ANS/LDOX 3 0.18% FLS 3 0.18% DFR 3 0.18% TAT 3 0.18% CYP51G1 3 0.18% DET2 3 0.18% ADC 2 0.12% 6OMT_4OMT_SOMT 2 0.12% CYP80F1 2 0.12% CCoAOMT 2 0.12% FPPS 2 0.12% HMGS 2 0.12% HDR/IspH 2 0.12% HDS/IspG 2 0.12% MVD 2 0.12% CMK/IspE 2 0.12% ISY 1 0.06% CYP719 1 0.06% HPPR 1 0.06% DWF1 1 0.06% HYD1 1 0.06% FK 1 0.06% SQE 1 0.06% DWF7 1 0.06% CPI1 1 0.06% HMGR 1 0.06% MDS/IspF 1 0.06% DXR 1 0.06% PMK 1 0.06% DXS 1 0.06% IDI 1 0.06% MCT/IspD 1 0.06%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 168 10 POD (80) View species results
Terpenoid pathway 151 19 BAHD (60) View species results
Alkaloid pathway 124 18 NMT (25) View species results
Rosmarinic acid pathway 74 7 C4H (31) View species results
Flavonoid pathway 73 11 UFGT (19) View species results
Steroid pathway 42 12 CAS (18) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 713 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 106 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: 7DLGT
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Gene Pathway Family Confidence Status
Gphi367500016640 Alkaloid 7DLGT high pass
Gphi367860018020 Alkaloid 7DLGT medium pass
Gphi368040018750 Alkaloid 7DLGT low borderline
Gphi370440024100 Alkaloid 7DLGT medium pass
Gphi375130041760 Alkaloid 7DLGT low borderline
Gphi375210042480 Alkaloid 7DLGT low borderline
Gphi379790073760 Alkaloid 7DLGT low borderline
Gphi382620103930 Alkaloid 7DLGT low borderline
Gphi384690133220 Alkaloid 7DLGT low borderline
Gphi384730133790 Alkaloid 7DLGT medium pass
Gphi384730133810 Alkaloid 7DLGT medium pass
Gphi385790153850 Alkaloid 7DLGT high pass
Gphi386280166360 Alkaloid 7DLGT low borderline
Gphi387870210330 Alkaloid 7DLGT medium pass
Gphi388930254190 Alkaloid 7DLGT medium pass
Gphi388930254210 Alkaloid 7DLGT medium pass
Gphi388930254230 Alkaloid 7DLGT medium pass
Gphi388930254240 Alkaloid 7DLGT medium pass
Gphi389490273470 Alkaloid 7DLGT medium pass
Gphi389490273490 Alkaloid 7DLGT medium pass