PlantSME Plant secondary metabolism enzyme database

Gollania philippinensis (gollania_philippinensis)

Imported from atlas release summary for Gollania philippinensis.

872
Candidate Protein Records
632
Pathway-Level Records
1684
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Algae
Site group 29
Bryophytes
Current group 125
Lycophytes/Ferns
Site group 4
Gymnosperms
Site group 6
Basal angiosperms
Site group 13
Monocots
Site group 117
Eudicots
Site group 495
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Pathway Coverage
Phenylpropanoid pathway 26.58% Terpenoid pathway 23.89% Alkaloid pathway 19.62% Rosmarinic acid pathway 11.71% Flavonoid pathway 11.55% Steroid pathway 6.65%
Family Distribution
C3'H/CYP98A 6.77% C4H 6.65% POD 5.34% BAHD 5.17% CYP76 4.99% 4CL 4.45% IFS 4.04% NMT 3.56%
Other Families 59.03%
More Families (95)
BR6OX2/CYP85A2 43 2.55% PAL 42 2.49% DWF4/CYP90B1 41 2.43% IFR 40 2.38% F3'H/CYP75B 39 2.32% IO 38 2.26% T3O 35 2.08% GS 34 2.02% STR 34 2.02% F3H 33 1.96% PYKS 24 1.43% UFGT 23 1.37% UGT 23 1.37% TRI/TRII 21 1.25% CAS 21 1.25% 7DLGT 20 1.19% CAD 20 1.19% CODM/T6ODM 19 1.13% SMT1/SMT2/SMT3 19 1.13% CYP71 19 1.13% 7DLH 17 1.01% CYP90D1 16 0.95% H6H 15 0.89% CHS 15 0.89% CSE 15 0.89% COMT 15 0.89% F3'5'H/CYP75A 13 0.77% G8O/G8H 12 0.71% CYP80B1 12 0.71% SLS 11 0.65% NCS 11 0.65% LAMT 10 0.59% SGD 10 0.59% RAS 10 0.59% T16H 9 0.53% 8HGO 9 0.53% HCT 9 0.53% 16OMT 8 0.48% LAC 8 0.48% CPD/CYP90A1 8 0.48% COR 7 0.42% GES 7 0.42% FNS 7 0.42% CNMT 6 0.36% ANR 6 0.36% CCR 6 0.36% CPR 6 0.36% SQS/FDFT1 6 0.36% BR6OX1/CYP85A1 6 0.36% ROT3/CYP90C1 6 0.36% TPS 6 0.36% PMT 5 0.3% BBE 5 0.3% AACT 5 0.3% GGPPS 5 0.3% TDC 4 0.24% CHI 4 0.24% F5H/CYP84A 4 0.24% DWF5 4 0.24% SMO1/SMO2 4 0.24% MVK 4 0.24% MPO 3 0.18% TYDC_DDC 3 0.18% ANS/LDOX 3 0.18% FLS 3 0.18% DFR 3 0.18% TAT 3 0.18% CYP51G1 3 0.18% DET2 3 0.18% ADC 2 0.12% 6OMT_4OMT_SOMT 2 0.12% CYP80F1 2 0.12% CCoAOMT 2 0.12% FPPS 2 0.12% HMGS 2 0.12% HDR/IspH 2 0.12% HDS/IspG 2 0.12% MVD 2 0.12% CMK/IspE 2 0.12% ISY 1 0.06% CYP719 1 0.06% HPPR 1 0.06% DWF1 1 0.06% HYD1 1 0.06% FK 1 0.06% SQE 1 0.06% DWF7 1 0.06% CPI1 1 0.06% HMGR 1 0.06% MDS/IspF 1 0.06% DXR 1 0.06% PMK 1 0.06% DXS 1 0.06% IDI 1 0.06% MCT/IspD 1 0.06%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Phenylpropanoid pathway 168 10 POD (80) View species results
Terpenoid pathway 151 19 BAHD (60) View species results
Alkaloid pathway 124 18 NMT (25) View species results
Rosmarinic acid pathway 74 7 C4H (31) View species results
Flavonoid pathway 73 11 UFGT (19) View species results
Steroid pathway 42 12 CAS (18) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 713 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 106 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Protein/Isoform Record Pathway Family Confidence Status Best Target
Gphi388820247340 Alkaloid TRI/TRII medium pass TRI_TRII__00007__sp_Q9ZW16_TRNHA_ARATH
Gphi388930253900 Alkaloid TRI/TRII medium pass TRI_TRII__00002__sp_H9BFQ0_TPRL1_ERYCB
Gphi388960255570 Alkaloid TRI/TRII low borderline TRI_TRII__00004__sp_H9BFQ2_TPRL3_ERYCB
Gphi388960255580 Alkaloid TRI/TRII low borderline TRI_TRII__00004__sp_H9BFQ2_TPRL3_ERYCB
Gphi379700073410 Alkaloid TYDC_DDC medium borderline TYDC_DDC__00005__sp_Q9M0G4_TYDC2_ARATH
Gphi387210189970 Alkaloid TYDC_DDC medium borderline TYDC_DDC__00005__sp_Q9M0G4_TYDC2_ARATH
Gphi387610203000 Alkaloid TYDC_DDC medium borderline TYDC_DDC__00005__sp_Q9M0G4_TYDC2_ARATH