PlantSME Plant secondary metabolism enzyme database

Guadua angustifolia (guadua_angustifolia)

Imported from atlas release summary for Guadua angustifolia.

242
Candidate Genes
76
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Algae
Site group 29
Bryophytes
Site group 125
Lycophytes/Ferns
Site group 4
Gymnosperms
Site group 6
Basal angiosperms
Site group 13
Monocots
Current group 117
Eudicots
Site group 495
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
Terpenoid pathway 29.75% Phenylpropanoid pathway 22.73% Alkaloid pathway 21.49% Flavonoid pathway 13.64% Rosmarinic acid pathway 9.09% Steroid pathway 3.31%
Family Distribution
C4H 7.69% C3'H/CYP98A 5.82% UGT 5.82% 7DLGT 4.69% POD 4.69% UFGT 4.5% BAHD 4.5% CYP76 3.75%
Other Families 58.54%
More Families (68)
T3O 18 3.38% F3'H/CYP75B 16 3.0% CYP71 16 3.0% NMT 13 2.44% LAC 13 2.44% STR 12 2.25% IFS 12 2.25% BR6OX2/CYP85A2 11 2.06% DWF4/CYP90B1 10 1.88% G8O/G8H 9 1.69% 4CL 9 1.69% PYKS 7 1.31% FNS 7 1.31% ANR 7 1.31% CSE 7 1.31% CAS 7 1.31% T16H 6 1.13% F3H 6 1.13% SMT1/SMT2/SMT3 6 1.13% GES 5 0.94% H6H 5 0.94% F3'5'H/CYP75A 5 0.94% CAD 5 0.94% CCR 5 0.94% TPS 5 0.94% SGD 4 0.75% SLS 4 0.75% TRI/TRII 4 0.75% IFR 4 0.75% CYP90D1 4 0.75% 16OMT 3 0.56% PMT 3 0.56% GS 3 0.56% PAL 3 0.56% COMT 3 0.56% RAS 3 0.56% SQS/FDFT1 3 0.56% CYP51G1 3 0.56% FPPS 3 0.56% CODM/T6ODM 2 0.38% NCS 2 0.38% COR 2 0.38% MPO 2 0.38% TYDC_DDC 2 0.38% CHS 2 0.38% DFR 2 0.38% HCT 2 0.38% HPPR 2 0.38% BR6OX1/CYP85A1 2 0.38% MVD 2 0.38% MVK 2 0.38% DXS 2 0.38% IDI 2 0.38% 7DLH 1 0.19% BBE 1 0.19% CYP80F1 1 0.19% XMT_MXMT_DXMT 1 0.19% ODC 1 0.19% IO 1 0.19% CYP80B1 1 0.19% ANS/LDOX 1 0.19% CCoAOMT 1 0.19% CPR 1 0.19% CPD/CYP90A1 1 0.19% ROT3/CYP90C1 1 0.19% SMO1/SMO2 1 0.19% HMGR 1 0.19% GGPPS 1 0.19%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 72 11 UGT (30) View species results
Phenylpropanoid pathway 55 11 POD (22) View species results
Alkaloid pathway 52 15 7DLGT (14) View species results
Flavonoid pathway 33 7 UFGT (23) View species results
Rosmarinic acid pathway 22 6 C4H (14) View species results
Steroid pathway 8 4 CAS (5) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 22 214 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 29 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CCR
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Gene Pathway Family Confidence Status Best Target
GangGan000824030069800.1 Phenylpropanoid CCR medium pass CCR__00001__sp_A0A059TC02_CCR1_PETHY
GangGan001950030139900.1 Phenylpropanoid CCR medium pass CCR__00001__sp_A0A059TC02_CCR1_PETHY
GangGan002889910193800.1 Phenylpropanoid CCR medium borderline CCR__00001__sp_A0A059TC02_CCR1_PETHY
GangGan003145250207400.1 Phenylpropanoid CCR medium pass CCR__00005__sp_Q0JKZ0_SNL6_ORYSJ
GangGan004119510253200.1 Phenylpropanoid CCR medium borderline CCR__00001__sp_A0A059TC02_CCR1_PETHY