PlantSME Plant secondary metabolism enzyme database

Haloxylon ammodendron (haloxylon_ammodendron)

Imported from atlas release summary for Haloxylon ammodendron.

1539
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Algae
Site group 29
Bryophytes
Site group 125
Lycophytes/Ferns
Site group 4
Gymnosperms
Site group 6
Basal angiosperms
Site group 13
Monocots
Site group 117
Eudicots
Current group 495
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
Terpenoid pathway 28.14% Alkaloid pathway 24.17% Phenylpropanoid pathway 22.03% Flavonoid pathway 13.52% Rosmarinic acid pathway 6.24% Steroid pathway 5.91%
Family Distribution
C4H 7.15% BAHD 5.88% POD 5.56% C3'H/CYP98A 4.79% UGT 4.23% 7DLGT 3.96% UFGT 3.72% 4CL 3.67%
Other Families 61.04%
More Families (96)
CYP76 127 3.38% F3H 117 3.11% IFS 105 2.79% NMT 93 2.47% T3O 76 2.02% F3'H/CYP75B 68 1.81% CODM/T6ODM 67 1.78% BR6OX2/CYP85A2 60 1.6% STR 59 1.57% H6H 59 1.57% TRI/TRII 58 1.54% DWF4/CYP90B1 57 1.52% G8O/G8H 55 1.46% COMT 54 1.44% SMT1/SMT2/SMT3 50 1.33% CAD 48 1.28% PYKS 45 1.2% CAS 43 1.14% HCT 41 1.09% SGD 39 1.04% CYP71 39 1.04% TPS 36 0.96% RAS 35 0.93% BBE 34 0.9% F3'5'H/CYP75A 34 0.9% T16H 33 0.88% IFR 32 0.85% GES 31 0.82% LAC 30 0.8% ANR 29 0.77% CSE 29 0.77% 7DLH 28 0.74% 16OMT 28 0.74% CCR 28 0.74% PMT 26 0.69% SLS 26 0.69% CHS 26 0.69% FNS 26 0.69% FPPS 26 0.69% GS 25 0.66% F5H/CYP84A 22 0.59% CYP90D1 22 0.59% BR6OX1/CYP85A1 19 0.51% COR 18 0.48% IO 17 0.45% TAT 14 0.37% CNMT 12 0.32% LAMT 12 0.32% CPD/CYP90A1 12 0.32% MPO 10 0.27% 6OMT_4OMT_SOMT 10 0.27% 8HGO 10 0.27% CCoAOMT 10 0.27% CYP80B1 9 0.24% NCS 9 0.24% CYP719 9 0.24% CPR 9 0.24% TYDC_DDC 8 0.21% DFR 8 0.21% ANS/LDOX 8 0.21% HPPR 8 0.21% SQS/FDFT1 8 0.21% CYP51G1 7 0.19% XMT_MXMT_DXMT 6 0.16% TDC 6 0.16% PAL 6 0.16% ROT3/CYP90C1 6 0.16% GGPPS 6 0.16% ISY 5 0.13% FLS 5 0.13% CPI1 5 0.13% MVD 5 0.13% DXS 5 0.13% SQE 4 0.11% MVK 4 0.11% HMGS 4 0.11% AACT 4 0.11% SMO1/SMO2 3 0.08% HMGR 3 0.08% ADC 2 0.05% CHI 2 0.05% FK 2 0.05% HYD1 2 0.05% DWF7 2 0.05% CMK/IspE 2 0.05% MCT/IspD 2 0.05% PMK 2 0.05% CYP80F1 1 0.03% DWF5 1 0.03% DET2 1 0.03% DWF1 1 0.03% HDR/IspH 1 0.03% MDS/IspF 1 0.03% DXR 1 0.03% HDS/IspG 1 0.03% IDI 1 0.03%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 433 19 BAHD (149) View species results
Alkaloid pathway 372 22 7DLGT (74) View species results
Phenylpropanoid pathway 339 12 POD (178) View species results
Flavonoid pathway 208 9 UFGT (134) View species results
Rosmarinic acid pathway 96 7 4CL (32) View species results
Steroid pathway 91 11 CAS (39) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1281 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 297 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: 6OMT_4OMT_SOMT
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Gene Pathway Family Confidence Status Best Target
haloxylon_ammodendron_SS02638.t1 Alkaloid 6OMT_4OMT_SOMT medium borderline 6OMT_4OMT_SOMT__00001__sp_D3KY98_OMT1_CARIP
haloxylon_ammodendron_SS03115.t1 Alkaloid 6OMT_4OMT_SOMT medium borderline 6OMT_4OMT_SOMT__00003__sp_Q5C9L7_6OMT_THLFG
haloxylon_ammodendron_SS04063.t1 Alkaloid 6OMT_4OMT_SOMT medium borderline 6OMT_4OMT_SOMT__00007__sp_Q9LEL6_6OMT_COPJA
haloxylon_ammodendron_SS04575.t1 Alkaloid 6OMT_4OMT_SOMT medium borderline 6OMT_4OMT_SOMT__00004__sp_Q6WUC1_6OMT_PAPSO
haloxylon_ammodendron_SS07129.t1 Alkaloid 6OMT_4OMT_SOMT medium borderline 6OMT_4OMT_SOMT__00003__sp_Q5C9L7_6OMT_THLFG
haloxylon_ammodendron_SS12259.t1 Alkaloid 6OMT_4OMT_SOMT medium pass 6OMT_4OMT_SOMT__00004__sp_Q6WUC1_6OMT_PAPSO
haloxylon_ammodendron_SS12260.t1 Alkaloid 6OMT_4OMT_SOMT low borderline 6OMT_4OMT_SOMT__00003__sp_Q5C9L7_6OMT_THLFG
haloxylon_ammodendron_SS23864.t1 Alkaloid 6OMT_4OMT_SOMT medium borderline 6OMT_4OMT_SOMT__00003__sp_Q5C9L7_6OMT_THLFG
haloxylon_ammodendron_SS23871.t1 Alkaloid 6OMT_4OMT_SOMT medium borderline 6OMT_4OMT_SOMT__00003__sp_Q5C9L7_6OMT_THLFG
haloxylon_ammodendron_SS36201.t1 Alkaloid 6OMT_4OMT_SOMT medium pass 6OMT_4OMT_SOMT__00003__sp_Q5C9L7_6OMT_THLFG