PlantSME Plant secondary metabolism enzyme database

Helianthus annuus (helianthus_annuus)

Imported from atlas release summary for Helianthus annuus.

2975
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Algae
Site group 29
Bryophytes
Site group 125
Lycophytes/Ferns
Site group 4
Gymnosperms
Site group 6
Basal angiosperms
Site group 13
Monocots
Site group 117
Eudicots
Current group 495
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
Terpenoid pathway 31.93% Alkaloid pathway 20.67% Phenylpropanoid pathway 18.99% Flavonoid pathway 12.91% Rosmarinic acid pathway 10.35% Steroid pathway 5.14%
Family Distribution
C4H 7.46% C3'H/CYP98A 6.8% BAHD 5.75% CYP76 4.6% IFS 4.22% UGT 4.17% 7DLGT 3.87% UFGT 3.86%
Other Families 59.27%
More Families (96)
T3O 273 3.7% 4CL 231 3.13% POD 202 2.73% DWF4/CYP90B1 198 2.68% F3H 179 2.42% F3'H/CYP75B 175 2.37% BR6OX2/CYP85A2 143 1.94% NMT 125 1.69% STR 111 1.5% TPS 106 1.43% CODM/T6ODM 101 1.37% GES 99 1.34% CAD 99 1.34% CYP71 95 1.29% SMT1/SMT2/SMT3 93 1.26% H6H 86 1.16% G8O/G8H 85 1.15% CSE 80 1.08% CAS 79 1.07% HCT 73 0.99% CYP90D1 71 0.96% LAC 69 0.93% TRI/TRII 67 0.91% TAT 66 0.89% T16H 65 0.88% RAS 63 0.85% PYKS 59 0.8% BBE 58 0.79% COMT 58 0.79% F3'5'H/CYP75A 57 0.77% 7DLH 53 0.72% FNS 53 0.72% PMT 51 0.69% GS 47 0.64% SLS 45 0.61% IFR 45 0.61% IO 44 0.6% 16OMT 42 0.57% SGD 40 0.54% NCS 39 0.53% F5H/CYP84A 37 0.5% CYP51G1 36 0.49% ANR 35 0.47% PAL 33 0.45% CPD/CYP90A1 33 0.45% 8HGO 30 0.41% BR6OX1/CYP85A1 23 0.31% CCoAOMT 22 0.3% ROT3/CYP90C1 21 0.28% LAMT 19 0.26% CYP80B1 19 0.26% CHS 19 0.26% CCR 19 0.26% CYP719 17 0.23% COR 17 0.23% FPPS 16 0.22% CPR 15 0.2% CNMT 13 0.18% ISY 13 0.18% ANS/LDOX 13 0.18% MPO 12 0.16% GGPPS 12 0.16% DET2 11 0.15% HPPR 10 0.14% 6OMT_4OMT_SOMT 9 0.12% SQE 9 0.12% TYDC_DDC 8 0.11% CHI 8 0.11% SMO1/SMO2 8 0.11% AACT 8 0.11% HDS/IspG 8 0.11% SQS/FDFT1 7 0.09% HMGR 7 0.09% XMT_MXMT_DXMT 6 0.08% MVD 6 0.08% DXS 6 0.08% MCT/IspD 6 0.08% DXR 6 0.08% HDR/IspH 6 0.08% DFR 5 0.07% TDC 4 0.05% ADC 4 0.05% DWF1 4 0.05% DWF7 4 0.05% MVK 4 0.05% CYP80F1 3 0.04% FLS 3 0.04% DWF5 3 0.04% HMGS 3 0.04% IDI 3 0.04% CMK/IspE 3 0.04% HYD1 2 0.03% PMK 2 0.03% FK 1 0.01% CPI1 1 0.01% MDS/IspF 1 0.01%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 950 21 BAHD (354) View species results
Alkaloid pathway 615 20 7DLGT (159) View species results
Phenylpropanoid pathway 565 13 POD (190) View species results
Flavonoid pathway 384 13 UFGT (269) View species results
Rosmarinic acid pathway 308 7 C4H (143) View species results
Steroid pathway 153 16 SMT1/SMT2/SMT3 (63) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 3198 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 561 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: TYDC_DDC
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Gene Pathway Family Confidence Status Best Target
Hann01G0020640.1 Alkaloid TYDC_DDC medium borderline TYDC_DDC__00003__sp_P17770_TDC_CATRO
Hann01G0026800.1 Alkaloid TYDC_DDC medium borderline TYDC_DDC__00002__sp_O82415_TYDC_PAPSO
Hann04G0021950.1 Alkaloid TYDC_DDC medium borderline TYDC_DDC__00002__sp_O82415_TYDC_PAPSO
Hann13G0009980.1 Alkaloid TYDC_DDC medium borderline TYDC_DDC__00005__sp_Q9M0G4_TYDC2_ARATH
Hann15G0031570.1 Alkaloid TYDC_DDC medium borderline TYDC_DDC__00002__sp_O82415_TYDC_PAPSO
Hann17G0001880.1 Alkaloid TYDC_DDC medium borderline TYDC_DDC__00003__sp_P17770_TDC_CATRO
Hann17G0001890.1 Alkaloid TYDC_DDC medium borderline TYDC_DDC__00003__sp_P17770_TDC_CATRO
Hann17G0001900.1 Alkaloid TYDC_DDC medium borderline TYDC_DDC__00003__sp_P17770_TDC_CATRO