Hordeum marinum (hordeum_marinum)
/
Imported from atlas release summary for Hordeum marinum.
2233
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Common name
/
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
2233
Candidate Genes
C3'H/CYP98A
6.8%
C4H
6.79%
POD
5.05%
BAHD
5.05%
UGT
4.51%
T3O
4.08%
7DLGT
4.07%
UFGT
3.92%
Other Families
59.72%
More Families (97)
CYP76
205
3.62%
IFS
201
3.55%
F3'H/CYP75B
155
2.74%
4CL
144
2.55%
DWF4/CYP90B1
141
2.49%
BR6OX2/CYP85A2
141
2.49%
F3H
138
2.44%
CYP71
113
2.0%
NMT
83
1.47%
CODM/T6ODM
73
1.29%
PYKS
71
1.25%
STR
71
1.25%
H6H
70
1.24%
SMT1/SMT2/SMT3
70
1.24%
CAD
68
1.2%
CSE
66
1.17%
LAC
56
0.99%
TPS
54
0.95%
PMT
53
0.94%
COMT
53
0.94%
CYP90D1
53
0.94%
PAL
51
0.9%
G8O/G8H
49
0.87%
SLS
49
0.87%
GES
48
0.85%
TRI/TRII
48
0.85%
T16H
46
0.81%
ANR
46
0.81%
CCR
46
0.81%
CAS
45
0.8%
RAS
43
0.76%
16OMT
42
0.74%
FNS
42
0.74%
HCT
42
0.74%
BBE
37
0.65%
SGD
35
0.62%
CHS
34
0.6%
IO
32
0.57%
IFR
32
0.57%
CYP51G1
32
0.57%
GS
30
0.53%
F3'5'H/CYP75A
28
0.49%
BR6OX1/CYP85A1
28
0.49%
NCS
26
0.46%
DFR
25
0.44%
TYDC_DDC
23
0.41%
F5H/CYP84A
23
0.41%
COR
21
0.37%
CPD/CYP90A1
21
0.37%
CNMT
20
0.35%
CYP719
17
0.3%
7DLH
16
0.28%
6OMT_4OMT_SOMT
16
0.28%
8HGO
15
0.27%
HPPR
11
0.19%
LAMT
10
0.18%
TAT
10
0.18%
AACT
9
0.16%
FPPS
9
0.16%
TDC
8
0.14%
ANS/LDOX
8
0.14%
MPO
7
0.12%
CPR
7
0.12%
SQS/FDFT1
7
0.12%
ISY
6
0.11%
ROT3/CYP90C1
6
0.11%
SMO1/SMO2
6
0.11%
GGPPS
6
0.11%
MVD
6
0.11%
XMT_MXMT_DXMT
5
0.09%
ODC
5
0.09%
CCoAOMT
5
0.09%
MVK
5
0.09%
ADC
4
0.07%
CYP80B1
3
0.05%
CHI
3
0.05%
FLS
3
0.05%
DWF1
3
0.05%
HYD1
3
0.05%
DET2
3
0.05%
SQE
3
0.05%
DXS
3
0.05%
IDI
3
0.05%
HDR/IspH
3
0.05%
HMGS
3
0.05%
HMGR
3
0.05%
CYP80F1
2
0.04%
FK
2
0.04%
CPI1
2
0.04%
CMK/IspE
2
0.04%
MDS/IspF
2
0.04%
DWF7
1
0.02%
DWF5
1
0.02%
MCT/IspD
1
0.02%
DXR
1
0.02%
PMK
1
0.02%
HDS/IspG
1
0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 606 | 18 | UGT (239) | View species results |
| Phenylpropanoid pathway | 534 | 12 | POD (270) | View species results |
| Alkaloid pathway | 489 | 22 | 7DLGT (117) | View species results |
| Flavonoid pathway | 318 | 13 | UFGT (213) | View species results |
| Rosmarinic acid pathway | 191 | 7 | C4H (107) | View species results |
| Steroid pathway | 95 | 13 | SMT1/SMT2/SMT3 (43) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 2361 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 371 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: GS
| Gene | Pathway | Family | Confidence | Status |
|---|---|---|---|---|
| hordeum_marinum_GWHPBJBH001909 | Alkaloid | GS | high | pass |
| hordeum_marinum_GWHPBJBH012235 | Alkaloid | GS | high | pass |
| hordeum_marinum_GWHPBJBH012897 | Alkaloid | GS | high | pass |
| hordeum_marinum_GWHPBJBH012898 | Alkaloid | GS | high | pass |
| hordeum_marinum_GWHPBJBH012959 | Alkaloid | GS | high | pass |
| hordeum_marinum_GWHPBJBH016120 | Alkaloid | GS | low | borderline |
| hordeum_marinum_GWHPBJBH017415 | Alkaloid | GS | low | borderline |
| hordeum_marinum_GWHPBJBH017419 | Alkaloid | GS | low | borderline |
| hordeum_marinum_GWHPBJBH020690 | Alkaloid | GS | low | borderline |
| hordeum_marinum_GWHPBJBH023249 | Alkaloid | GS | low | borderline |
| hordeum_marinum_GWHPBJBH029636 | Alkaloid | GS | low | borderline |
| hordeum_marinum_GWHPBJBH032168 | Alkaloid | GS | high | pass |
| hordeum_marinum_GWHPBJBH032173 | Alkaloid | GS | high | pass |
| hordeum_marinum_GWHPBJBH041933 | Alkaloid | GS | low | borderline |
| hordeum_marinum_GWHPBJBH046686 | Alkaloid | GS | high | pass |
| hordeum_marinum_GWHPBJBH048269 | Alkaloid | GS | low | borderline |
| hordeum_marinum_GWHPBJBH048276 | Alkaloid | GS | low | borderline |
| hordeum_marinum_GWHPBJBH055588 | Alkaloid | GS | low | borderline |
| hordeum_marinum_GWHPBJBH056368 | Alkaloid | GS | low | borderline |
| hordeum_marinum_GWHPBJBH057214 | Alkaloid | GS | high | pass |
| hordeum_marinum_GWHPBJBH058932 | Alkaloid | GS | low | borderline |
| hordeum_marinum_GWHPBJBH060168 | Alkaloid | GS | low | borderline |
| hordeum_marinum_GWHPBJBH061260 | Alkaloid | GS | high | pass |
| hordeum_marinum_GWHPBJBH061831 | Alkaloid | GS | low | borderline |
| hordeum_marinum_GWHPBJBH061832 | Alkaloid | GS | low | borderline |
| hordeum_marinum_GWHPBJBH065907 | Alkaloid | GS | high | pass |
| hordeum_marinum_GWHPBJBH067614 | Alkaloid | GS | medium | pass |
| hordeum_marinum_GWHPBJBH068918 | Alkaloid | GS | medium | pass |
| hordeum_marinum_GWHPBJBH069089 | Alkaloid | GS | high | pass |
| hordeum_marinum_GWHPBJBH070151 | Alkaloid | GS | high | pass |