PlantSME Plant secondary metabolism enzyme database

Hygrohypnum luridum (hygrohypnum_luridum)

Imported from atlas release summary for Hygrohypnum luridum.

644
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Algae
Site group 29
Bryophytes
Current group 125
Lycophytes/Ferns
Site group 4
Gymnosperms
Site group 6
Basal angiosperms
Site group 13
Monocots
Site group 117
Eudicots
Site group 495
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
Phenylpropanoid pathway 25.31% Terpenoid pathway 24.69% Alkaloid pathway 19.88% Flavonoid pathway 12.89% Rosmarinic acid pathway 10.4% Steroid pathway 6.83%
Family Distribution
C4H 6.76% C3'H/CYP98A 5.88% POD 5.13% BAHD 5.13% CYP76 4.66% 4CL 4.54% NMT 3.79% F3'H/CYP75B 2.85%
Other Families 61.27%
More Families (95)
IFS 48 2.8% DWF4/CYP90B1 48 2.8% T3O 43 2.5% F3H 41 2.39% IFR 40 2.33% STR 39 2.27% PAL 39 2.27% GS 38 2.21% BR6OX2/CYP85A2 29 1.69% UGT 29 1.69% PYKS 27 1.57% CODM/T6ODM 26 1.51% 7DLGT 26 1.51% UFGT 26 1.51% CAD 23 1.34% TRI/TRII 20 1.16% CAS 20 1.16% SMT1/SMT2/SMT3 19 1.11% CYP71 19 1.11% IO 18 1.05% CHS 18 1.05% F3'5'H/CYP75A 18 1.05% COMT 17 0.99% G8O/G8H 16 0.93% CYP90D1 15 0.87% 7DLH 14 0.82% H6H 13 0.76% HCT 13 0.76% T16H 12 0.7% SLS 11 0.64% NCS 10 0.58% CSE 10 0.58% LAC 10 0.58% RAS 10 0.58% BR6OX1/CYP85A1 10 0.58% LAMT 9 0.52% CNMT 9 0.52% CYP80B1 9 0.52% BBE 9 0.52% 16OMT 8 0.47% COR 8 0.47% PMT 8 0.47% SGD 7 0.41% 8HGO 7 0.41% FNS 7 0.41% CPR 7 0.41% CPD/CYP90A1 7 0.41% ROT3/CYP90C1 7 0.41% TDC 6 0.35% F5H/CYP84A 6 0.35% SQS/FDFT1 6 0.35% GGPPS 6 0.35% TPS 6 0.35% GES 5 0.29% ANR 5 0.29% CCR 5 0.29% TAT 5 0.29% MPO 4 0.23% DFR 4 0.23% CHI 4 0.23% DWF5 4 0.23% AACT 4 0.23% ADC 3 0.17% CCoAOMT 3 0.17% HPPR 3 0.17% CYP51G1 3 0.17% DET2 3 0.17% MVK 3 0.17% MVD 3 0.17% HDS/IspG 3 0.17% IDI 3 0.17% TYDC_DDC 2 0.12% 6OMT_4OMT_SOMT 2 0.12% CYP719 2 0.12% ISY 2 0.12% FLS 2 0.12% SQE 2 0.12% SMO1/SMO2 2 0.12% DWF1 2 0.12% HYD1 2 0.12% CPI1 2 0.12% MDS/IspF 2 0.12% HDR/IspH 2 0.12% MCT/IspD 2 0.12% FPPS 2 0.12% XMT_MXMT_DXMT 1 0.06% CYP80F1 1 0.06% FK 1 0.06% DWF7 1 0.06% DXR 1 0.06% CMK/IspE 1 0.06% PMK 1 0.06% HMGR 1 0.06% HMGS 1 0.06% DXS 1 0.06%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 163 10 POD (83) View species results
Terpenoid pathway 159 19 BAHD (55) View species results
Alkaloid pathway 128 17 NMT (26) View species results
Flavonoid pathway 83 9 UFGT (23) View species results
Rosmarinic acid pathway 67 7 C4H (26) View species results
Steroid pathway 44 13 CAS (17) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 682 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 111 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: G8O/G8H
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Gene Pathway Family Confidence Status
Hlur1317850015580 Alkaloid G8O/G8H medium borderline
Hlur1319560044150 Alkaloid G8O/G8H low borderline
Hlur1319600045300 Alkaloid G8O/G8H medium pass
Hlur1319720051640 Alkaloid G8O/G8H medium pass
Hlur1319720051670 Alkaloid G8O/G8H medium borderline
Hlur1320150076020 Alkaloid G8O/G8H medium borderline
Hlur1320240081030 Alkaloid G8O/G8H medium borderline
Hlur1320270087370 Alkaloid G8O/G8H medium borderline
Hlur1321000137380 Alkaloid G8O/G8H medium borderline
Hlur1321020140560 Alkaloid G8O/G8H medium borderline
Hlur1321090146250 Alkaloid G8O/G8H medium borderline
Hlur1321600183100 Alkaloid G8O/G8H medium borderline
Hlur1322000204400 Alkaloid G8O/G8H medium borderline
Hlur1322300222750 Alkaloid G8O/G8H medium borderline
Hlur1322360240230 Alkaloid G8O/G8H medium borderline
Hlur320250550 Alkaloid G8O/G8H medium borderline