PlantSME Plant secondary metabolism enzyme database

Ilex asprella (ilex_asprella)

Imported from atlas release summary for Ilex asprella.

2086
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Algae
Site group 29
Bryophytes
Site group 125
Lycophytes/Ferns
Site group 4
Gymnosperms
Site group 6
Basal angiosperms
Site group 13
Monocots
Site group 117
Eudicots
Current group 495
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
Terpenoid pathway 30.97% Alkaloid pathway 23.59% Phenylpropanoid pathway 17.26% Flavonoid pathway 13.85% Rosmarinic acid pathway 8.53% Steroid pathway 5.8%
Family Distribution
C4H 5.9% UGT 5.82% C3'H/CYP98A 5.69% 7DLGT 4.76% BAHD 4.54% UFGT 4.44% 4CL 3.44% IFS 3.42%
Other Families 61.99%
More Families (97)
CYP76 166 3.28% POD 161 3.18% F3H 146 2.88% T3O 145 2.86% F3'H/CYP75B 109 2.15% CAD 109 2.15% DWF4/CYP90B1 108 2.13% CODM/T6ODM 100 1.97% TPS 81 1.6% NMT 79 1.56% BR6OX2/CYP85A2 76 1.5% H6H 73 1.44% BBE 73 1.44% GES 72 1.42% STR 65 1.28% CAS 65 1.28% SMT1/SMT2/SMT3 64 1.26% CYP71 62 1.22% TRI/TRII 61 1.2% GS 58 1.15% CYP90D1 50 0.99% HCT 49 0.97% IO 47 0.93% T16H 46 0.91% CSE 45 0.89% SGD 42 0.83% G8O/G8H 40 0.79% TAT 40 0.79% 7DLH 39 0.77% LAC 38 0.75% IFR 37 0.73% PYKS 32 0.63% ANR 32 0.63% DFR 31 0.61% CPD/CYP90A1 30 0.59% FNS 29 0.57% ANS/LDOX 28 0.55% F3'5'H/CYP75A 28 0.55% COMT 28 0.55% CCR 25 0.49% PMT 24 0.47% SLS 24 0.47% RAS 23 0.45% BR6OX1/CYP85A1 23 0.45% F5H/CYP84A 22 0.43% LAMT 21 0.41% CYP51G1 21 0.41% NCS 20 0.39% 8HGO 20 0.39% AACT 19 0.38% PAL 18 0.36% COR 17 0.34% CNMT 16 0.32% 16OMT 16 0.32% MPO 15 0.3% ROT3/CYP90C1 15 0.3% FPPS 14 0.28% ISY 13 0.26% GGPPS 13 0.26% CYP719 10 0.2% SQE 10 0.2% TYDC_DDC 9 0.18% CPR 9 0.18% CHS 8 0.16% HPPR 8 0.16% XMT_MXMT_DXMT 7 0.14% CCoAOMT 7 0.14% SQS/FDFT1 7 0.14% SMO1/SMO2 7 0.14% DXS 7 0.14% DXR 7 0.14% 6OMT_4OMT_SOMT 6 0.12% PMK 6 0.12% CYP80B1 5 0.1% FLS 5 0.1% CHI 5 0.1% MVK 5 0.1% MVD 5 0.1% HMGR 5 0.1% DET2 4 0.08% TDC 3 0.06% CYP80F1 3 0.06% ADC 3 0.06% DWF5 3 0.06% HMGS 3 0.06% MCT/IspD 3 0.06% HYD1 2 0.04% MDS/IspF 2 0.04% IDI 2 0.04% HDS/IspG 2 0.04% CMK/IspE 2 0.04% HDR/IspH 2 0.04% ODC 1 0.02% DWF1 1 0.02% CPI1 1 0.02% DWF7 1 0.02% FK 1 0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 646 20 UGT (273) View species results
Alkaloid pathway 492 26 7DLGT (130) View species results
Phenylpropanoid pathway 360 11 POD (148) View species results
Flavonoid pathway 289 12 UFGT (204) View species results
Rosmarinic acid pathway 178 7 C4H (77) View species results
Steroid pathway 121 12 CAS (54) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1829 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 302 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: SQE
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Gene Pathway Family Confidence Status Best Target
ilex_asprella_Ilex_004339-T1 Steroid SQE medium pass SQE__00002__sp_O48651_SQE1_PANGI
ilex_asprella_Ilex_024188-T1 Steroid SQE medium pass SQE__00002__sp_O48651_SQE1_PANGI
ilex_asprella_Ilex_029513-T1 Steroid SQE low borderline SQE__00002__sp_O48651_SQE1_PANGI
ilex_asprella_Ilex_034946-T1 Steroid SQE medium pass SQE__00002__sp_O48651_SQE1_PANGI
ilex_asprella_Ilex_035055-T1 Steroid SQE medium pass SQE__00001__sp_B7TWW5_SQE2_PANGI
ilex_asprella_Ilex_044388-T1 Steroid SQE medium pass SQE__00001__sp_B7TWW5_SQE2_PANGI
ilex_asprella_Ilex_044389-T1 Steroid SQE medium pass SQE__00002__sp_O48651_SQE1_PANGI
ilex_asprella_Ilex_045909-T1 Steroid SQE medium pass SQE__00002__sp_O48651_SQE1_PANGI
ilex_asprella_Ilex_049784-T1 Steroid SQE medium pass SQE__00002__sp_O48651_SQE1_PANGI
ilex_asprella_Ilex_049785-T1 Steroid SQE medium pass SQE__00002__sp_O48651_SQE1_PANGI