Iochroma cyaneum (iochroma_cyaneum)
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Imported from atlas release summary for Iochroma cyaneum.
2741
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
2741
Candidate Genes
C4H
7.34%
C3'H/CYP98A
6.55%
UGT
4.67%
BAHD
4.54%
T3O
4.26%
7DLGT
4.13%
UFGT
4.08%
IFS
3.92%
Other Families
60.5%
More Families (98)
CYP76
263
3.7%
POD
210
2.95%
4CL
204
2.87%
F3H
200
2.81%
F3'H/CYP75B
187
2.63%
DWF4/CYP90B1
187
2.63%
TPS
182
2.56%
GES
171
2.4%
CYP71
166
2.33%
BR6OX2/CYP85A2
143
2.01%
CAD
136
1.91%
H6H
116
1.63%
CODM/T6ODM
109
1.53%
NMT
99
1.39%
STR
96
1.35%
TRI/TRII
78
1.1%
TAT
76
1.07%
CAS
76
1.07%
SMT1/SMT2/SMT3
72
1.01%
CYP90D1
60
0.84%
CSE
58
0.82%
T16H
57
0.8%
LAC
55
0.77%
G8O/G8H
54
0.76%
HCT
49
0.69%
CYP51G1
49
0.69%
BBE
48
0.67%
7DLH
47
0.66%
F5H/CYP84A
46
0.65%
SLS
45
0.63%
PYKS
45
0.63%
FNS
42
0.59%
F3'5'H/CYP75A
42
0.59%
COMT
42
0.59%
IO
40
0.56%
LAMT
39
0.55%
GS
37
0.52%
PMT
34
0.48%
ANR
34
0.48%
IFR
34
0.48%
16OMT
32
0.45%
CPD/CYP90A1
30
0.42%
SGD
29
0.41%
RAS
29
0.41%
BR6OX1/CYP85A1
26
0.37%
CCR
24
0.34%
NCS
23
0.32%
ROT3/CYP90C1
21
0.3%
TYDC_DDC
18
0.25%
PAL
18
0.25%
FPPS
18
0.25%
CYP80B1
17
0.24%
8HGO
17
0.24%
ANS/LDOX
17
0.24%
CNMT
16
0.22%
CHS
15
0.21%
CCoAOMT
15
0.21%
COR
12
0.17%
SQS/FDFT1
12
0.17%
GGPPS
11
0.15%
CYP719
10
0.14%
DFR
10
0.14%
CPR
10
0.14%
HPPR
10
0.14%
AACT
10
0.14%
XMT_MXMT_DXMT
9
0.13%
ODC
8
0.11%
MVK
8
0.11%
6OMT_4OMT_SOMT
7
0.1%
MPO
7
0.1%
SQE
7
0.1%
TDC
5
0.07%
ISY
5
0.07%
FLS
5
0.07%
HMGR
5
0.07%
MVD
5
0.07%
ADC
4
0.06%
DWF1
4
0.06%
DET2
4
0.06%
SMO1/SMO2
4
0.06%
DXS
4
0.06%
IDI
4
0.06%
HMGS
4
0.06%
CHI
3
0.04%
DWF7
3
0.04%
GPPS
3
0.04%
CYP80F1
2
0.03%
DWF5
2
0.03%
CMK/IspE
2
0.03%
PMK
2
0.03%
HDR/IspH
2
0.03%
HYD1
1
0.01%
CPI1
1
0.01%
FK
1
0.01%
HDS/IspG
1
0.01%
DXR
1
0.01%
MCT/IspD
1
0.01%
MDS/IspF
1
0.01%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 875 | 21 | UGT (310) | View species results |
| Alkaloid pathway | 624 | 26 | GES (156) | View species results |
| Phenylpropanoid pathway | 456 | 12 | POD (196) | View species results |
| Flavonoid pathway | 373 | 11 | UFGT (268) | View species results |
| Rosmarinic acid pathway | 284 | 7 | C4H (152) | View species results |
| Steroid pathway | 129 | 14 | CAS (55) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 3062 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 401 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: NMT
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| iochroma_cyaneum_IC09g026740.1 | Alkaloid | NMT | medium | borderline | NMT__00070__sp_W5U2K2_NMT_CATRO |
| iochroma_cyaneum_IC09g026750.1 | Alkaloid | NMT | medium | borderline | NMT__00070__sp_W5U2K2_NMT_CATRO |
| iochroma_cyaneum_IC09g026760.1 | Alkaloid | NMT | medium | borderline | NMT__00070__sp_W5U2K2_NMT_CATRO |
| iochroma_cyaneum_IC09g026770.1 | Alkaloid | NMT | medium | borderline | NMT__00070__sp_W5U2K2_NMT_CATRO |
| iochroma_cyaneum_IC09g026780.1 | Alkaloid | NMT | medium | borderline | NMT__00070__sp_W5U2K2_NMT_CATRO |
| iochroma_cyaneum_IC09g026820.1 | Alkaloid | NMT | medium | borderline | NMT__00070__sp_W5U2K2_NMT_CATRO |
| iochroma_cyaneum_IC09g026840.1 | Alkaloid | NMT | medium | borderline | NMT__00070__sp_W5U2K2_NMT_CATRO |
| iochroma_cyaneum_IC09g026850.1 | Alkaloid | NMT | medium | borderline | NMT__00070__sp_W5U2K2_NMT_CATRO |
| iochroma_cyaneum_IC09g026960.1 | Alkaloid | NMT | low | borderline | NMT__00048__sp_Q8W595_SUVR4_ARATH |
| iochroma_cyaneum_IC09g027360.1 | Alkaloid | NMT | medium | pass | NMT__00067__sp_Q9T0G7_SUVH9_ARATH |
| iochroma_cyaneum_IC09g028900.1 | Alkaloid | NMT | medium | borderline | NMT__00058__sp_Q9FZN8_TCS1_CAMSI |
| iochroma_cyaneum_IC09g031530.1 | Alkaloid | NMT | medium | pass | NMT__00024__sp_P0CB22_ATX2_ARATH |
| iochroma_cyaneum_IC10g005260.1 | Alkaloid | NMT | medium | pass | NMT__00049__sp_Q93YF5_SUVH1_TOBAC |
| iochroma_cyaneum_IC10g007970.1 | Alkaloid | NMT | medium | borderline | NMT__00057__sp_Q9FR44_PEAM1_ARATH |
| iochroma_cyaneum_IC10g011210.1 | Alkaloid | NMT | low | borderline | NMT__00056__sp_Q9FNE9_ATXR6_ARATH |
| iochroma_cyaneum_IC10g015100.1 | Alkaloid | NMT | medium | borderline | NMT__00018__sp_I1M2U5_NAMT1_SOYBN |
| iochroma_cyaneum_IC10g018700.1 | Alkaloid | NMT | low | borderline | NMT__00028__sp_Q2LAE1_ASHH2_ARATH |
| iochroma_cyaneum_IC11g019490.1 | Alkaloid | NMT | medium | pass | NMT__00028__sp_Q2LAE1_ASHH2_ARATH |
| iochroma_cyaneum_IC11g019500.1 | Alkaloid | NMT | low | borderline | NMT__00028__sp_Q2LAE1_ASHH2_ARATH |
| iochroma_cyaneum_IC12g009090.1 | Alkaloid | NMT | medium | pass | NMT__00016__sp_F4JNX3_CMKMT_ARATH |
| iochroma_cyaneum_IC12g012390.1 | Alkaloid | NMT | medium | pass | NMT__00025__sp_P93831_CLF_ARATH |
| iochroma_cyaneum_IC12g019070.1 | Alkaloid | NMT | medium | borderline | NMT__00050__sp_Q944H0_PEAM2_ARATH |
| iochroma_cyaneum_IC12g030150.1 | Alkaloid | NMT | medium | pass | NMT__00039__sp_Q84W92_ANM13_ARATH |
| iochroma_cyaneum_scaffold00071s005390.1 | Alkaloid | NMT | medium | pass | NMT__00067__sp_Q9T0G7_SUVH9_ARATH |
| iochroma_cyaneum_scaffold00085s005010.1 | Alkaloid | NMT | medium | borderline | NMT__00070__sp_W5U2K2_NMT_CATRO |
| iochroma_cyaneum_scaffold00085s005020.1 | Alkaloid | NMT | medium | borderline | NMT__00070__sp_W5U2K2_NMT_CATRO |
| iochroma_cyaneum_scaffold00118s005170.1 | Alkaloid | NMT | low | borderline | NMT__00035__sp_Q6K431_TRX1_ORYSJ |
| iochroma_cyaneum_scaffold00154s005220.1 | Alkaloid | NMT | medium | pass | NMT__00069__sp_Q9ZSM8_EZA1_ARATH |
| iochroma_cyaneum_scaffold02065s005010.1 | Alkaloid | NMT | low | borderline | NMT__00048__sp_Q8W595_SUVR4_ARATH |
| iochroma_cyaneum_scaffold07053s005010.1 | Alkaloid | NMT | medium | pass | NMT__00067__sp_Q9T0G7_SUVH9_ARATH |
| iochroma_cyaneum_scaffold08911s005030.1 | Alkaloid | NMT | medium | pass | NMT__00008__sp_A0AA51VIL5_NMT2_LOPWI |
| iochroma_cyaneum_scaffold09873s005010.1 | Alkaloid | NMT | medium | borderline | NMT__00070__sp_W5U2K2_NMT_CATRO |
| iochroma_cyaneum_scaffold11287s005010.1 | Alkaloid | NMT | medium | pass | NMT__00040__sp_Q84WW6_ASHH1_ARATH |
| iochroma_cyaneum_scaffold11518s005010.1 | Alkaloid | NMT | low | borderline | NMT__00040__sp_Q84WW6_ASHH1_ARATH |
| iochroma_cyaneum_scaffold12654s005010.1 | Alkaloid | NMT | medium | pass | NMT__00025__sp_P93831_CLF_ARATH |
| iochroma_cyaneum_scaffold19520s005140.1 | Alkaloid | NMT | low | borderline | NMT__00016__sp_F4JNX3_CMKMT_ARATH |
| iochroma_cyaneum_scaffold20057s005310.1 | Alkaloid | NMT | medium | pass | NMT__00042__sp_Q8GZB6_SUVH4_ARATH |
| iochroma_cyaneum_scaffold20106s005210.1 | Alkaloid | NMT | medium | borderline | NMT__00050__sp_Q944H0_PEAM2_ARATH |
| iochroma_cyaneum_scaffold20114s005530.1 | Alkaloid | NMT | low | borderline | NMT__00035__sp_Q6K431_TRX1_ORYSJ |
| iochroma_cyaneum_scaffold20149s005440.1 | Alkaloid | NMT | medium | pass | NMT__00024__sp_P0CB22_ATX2_ARATH |
| iochroma_cyaneum_scaffold20154s005010.1 | Alkaloid | NMT | medium | pass | NMT__00015__sp_C8YTM5_PEAM2_WHEAT |
| iochroma_cyaneum_scaffold20228s005420.1 | Alkaloid | NMT | medium | pass | NMT__00056__sp_Q9FNE9_ATXR6_ARATH |
| iochroma_cyaneum_scaffold20308s005060.1 | Alkaloid | NMT | medium | borderline | NMT__00023__sp_O82210_ANM12_ARATH |
| iochroma_cyaneum_scaffold20310s005060.1 | Alkaloid | NMT | low | borderline | NMT__00035__sp_Q6K431_TRX1_ORYSJ |
| iochroma_cyaneum_scaffold20319s005180.1 | Alkaloid | NMT | low | borderline | NMT__00068__sp_Q9XI84_RBCMT_ARATH |
| iochroma_cyaneum_scaffold20370s005250.1 | Alkaloid | NMT | low | borderline | NMT__00028__sp_Q2LAE1_ASHH2_ARATH |
| iochroma_cyaneum_scaffold20539s005030.1 | Alkaloid | NMT | medium | borderline | NMT__00066__sp_Q9SU94_ANM11_ARATH |
| iochroma_cyaneum_scaffold20601s005530.1 | Alkaloid | NMT | low | borderline | NMT__00056__sp_Q9FNE9_ATXR6_ARATH |
| iochroma_cyaneum_scaffold20700s005040.1 | Alkaloid | NMT | low | borderline | NMT__00056__sp_Q9FNE9_ATXR6_ARATH |