Iochroma cyaneum (iochroma_cyaneum)
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Imported from atlas release summary for Iochroma cyaneum.
2741
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
2741
Candidate Genes
C4H
7.34%
C3'H/CYP98A
6.55%
UGT
4.67%
BAHD
4.54%
T3O
4.26%
7DLGT
4.13%
UFGT
4.08%
IFS
3.92%
Other Families
60.5%
More Families (98)
CYP76
263
3.7%
POD
210
2.95%
4CL
204
2.87%
F3H
200
2.81%
F3'H/CYP75B
187
2.63%
DWF4/CYP90B1
187
2.63%
TPS
182
2.56%
GES
171
2.4%
CYP71
166
2.33%
BR6OX2/CYP85A2
143
2.01%
CAD
136
1.91%
H6H
116
1.63%
CODM/T6ODM
109
1.53%
NMT
99
1.39%
STR
96
1.35%
TRI/TRII
78
1.1%
TAT
76
1.07%
CAS
76
1.07%
SMT1/SMT2/SMT3
72
1.01%
CYP90D1
60
0.84%
CSE
58
0.82%
T16H
57
0.8%
LAC
55
0.77%
G8O/G8H
54
0.76%
HCT
49
0.69%
CYP51G1
49
0.69%
BBE
48
0.67%
7DLH
47
0.66%
F5H/CYP84A
46
0.65%
SLS
45
0.63%
PYKS
45
0.63%
FNS
42
0.59%
F3'5'H/CYP75A
42
0.59%
COMT
42
0.59%
IO
40
0.56%
LAMT
39
0.55%
GS
37
0.52%
PMT
34
0.48%
ANR
34
0.48%
IFR
34
0.48%
16OMT
32
0.45%
CPD/CYP90A1
30
0.42%
SGD
29
0.41%
RAS
29
0.41%
BR6OX1/CYP85A1
26
0.37%
CCR
24
0.34%
NCS
23
0.32%
ROT3/CYP90C1
21
0.3%
TYDC_DDC
18
0.25%
PAL
18
0.25%
FPPS
18
0.25%
CYP80B1
17
0.24%
8HGO
17
0.24%
ANS/LDOX
17
0.24%
CNMT
16
0.22%
CHS
15
0.21%
CCoAOMT
15
0.21%
COR
12
0.17%
SQS/FDFT1
12
0.17%
GGPPS
11
0.15%
CYP719
10
0.14%
DFR
10
0.14%
CPR
10
0.14%
HPPR
10
0.14%
AACT
10
0.14%
XMT_MXMT_DXMT
9
0.13%
ODC
8
0.11%
MVK
8
0.11%
6OMT_4OMT_SOMT
7
0.1%
MPO
7
0.1%
SQE
7
0.1%
TDC
5
0.07%
ISY
5
0.07%
FLS
5
0.07%
HMGR
5
0.07%
MVD
5
0.07%
ADC
4
0.06%
DWF1
4
0.06%
DET2
4
0.06%
SMO1/SMO2
4
0.06%
DXS
4
0.06%
IDI
4
0.06%
HMGS
4
0.06%
CHI
3
0.04%
DWF7
3
0.04%
GPPS
3
0.04%
CYP80F1
2
0.03%
DWF5
2
0.03%
CMK/IspE
2
0.03%
PMK
2
0.03%
HDR/IspH
2
0.03%
HYD1
1
0.01%
CPI1
1
0.01%
FK
1
0.01%
HDS/IspG
1
0.01%
DXR
1
0.01%
MCT/IspD
1
0.01%
MDS/IspF
1
0.01%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 875 | 21 | UGT (310) | View species results |
| Alkaloid pathway | 624 | 26 | GES (156) | View species results |
| Phenylpropanoid pathway | 456 | 12 | POD (196) | View species results |
| Flavonoid pathway | 373 | 11 | UFGT (268) | View species results |
| Rosmarinic acid pathway | 284 | 7 | C4H (152) | View species results |
| Steroid pathway | 129 | 14 | CAS (55) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 3062 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 401 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: SLS
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| iochroma_cyaneum_IC01g023750.1 | Alkaloid | SLS | low | borderline | SLS__00001__sp_Q05047_SLS1_CATRO |
| iochroma_cyaneum_IC02g030530.1 | Alkaloid | SLS | medium | borderline | SLS__00002__sp_U5NDT8_SLS2_CATRO |
| iochroma_cyaneum_IC03g011120.1 | Alkaloid | SLS | medium | borderline | SLS__00002__sp_U5NDT8_SLS2_CATRO |
| iochroma_cyaneum_IC03g024070.1 | Alkaloid | SLS | medium | borderline | SLS__00001__sp_Q05047_SLS1_CATRO |
| iochroma_cyaneum_IC03g026330.1 | Alkaloid | SLS | medium | pass | SLS__00001__sp_Q05047_SLS1_CATRO |
| iochroma_cyaneum_IC03g026360.1 | Alkaloid | SLS | medium | borderline | SLS__00001__sp_Q05047_SLS1_CATRO |
| iochroma_cyaneum_IC03g026410.1 | Alkaloid | SLS | medium | borderline | SLS__00001__sp_Q05047_SLS1_CATRO |
| iochroma_cyaneum_IC03g026430.1 | Alkaloid | SLS | medium | borderline | SLS__00001__sp_Q05047_SLS1_CATRO |
| iochroma_cyaneum_IC05g008960.1 | Alkaloid | SLS | medium | borderline | SLS__00002__sp_U5NDT8_SLS2_CATRO |
| iochroma_cyaneum_IC05g013110.1 | Alkaloid | SLS | medium | borderline | SLS__00001__sp_Q05047_SLS1_CATRO |
| iochroma_cyaneum_IC05g013200.1 | Alkaloid | SLS | medium | borderline | SLS__00002__sp_U5NDT8_SLS2_CATRO |
| iochroma_cyaneum_IC05g018960.1 | Alkaloid | SLS | medium | borderline | SLS__00001__sp_Q05047_SLS1_CATRO |
| iochroma_cyaneum_IC05g018970.1 | Alkaloid | SLS | medium | borderline | SLS__00001__sp_Q05047_SLS1_CATRO |
| iochroma_cyaneum_IC05g024890.1 | Alkaloid | SLS | medium | borderline | SLS__00001__sp_Q05047_SLS1_CATRO |
| iochroma_cyaneum_IC06g016650.1 | Alkaloid | SLS | medium | borderline | SLS__00001__sp_Q05047_SLS1_CATRO |
| iochroma_cyaneum_IC06g021280.1 | Alkaloid | SLS | medium | borderline | SLS__00001__sp_Q05047_SLS1_CATRO |
| iochroma_cyaneum_IC06g021290.1 | Alkaloid | SLS | medium | borderline | SLS__00001__sp_Q05047_SLS1_CATRO |
| iochroma_cyaneum_IC07g005400.1 | Alkaloid | SLS | medium | borderline | SLS__00001__sp_Q05047_SLS1_CATRO |
| iochroma_cyaneum_IC07g016430.1 | Alkaloid | SLS | medium | borderline | SLS__00001__sp_Q05047_SLS1_CATRO |
| iochroma_cyaneum_IC07g019670.1 | Alkaloid | SLS | medium | borderline | SLS__00001__sp_Q05047_SLS1_CATRO |
| iochroma_cyaneum_IC07g025730.1 | Alkaloid | SLS | medium | borderline | SLS__00002__sp_U5NDT8_SLS2_CATRO |
| iochroma_cyaneum_IC07g025760.1 | Alkaloid | SLS | medium | borderline | SLS__00001__sp_Q05047_SLS1_CATRO |
| iochroma_cyaneum_IC07g025820.1 | Alkaloid | SLS | medium | borderline | SLS__00001__sp_Q05047_SLS1_CATRO |
| iochroma_cyaneum_IC07g029710.1 | Alkaloid | SLS | medium | borderline | SLS__00001__sp_Q05047_SLS1_CATRO |
| iochroma_cyaneum_IC08g032030.1 | Alkaloid | SLS | medium | borderline | SLS__00001__sp_Q05047_SLS1_CATRO |
| iochroma_cyaneum_IC08g032070.1 | Alkaloid | SLS | medium | borderline | SLS__00001__sp_Q05047_SLS1_CATRO |
| iochroma_cyaneum_IC08g032110.1 | Alkaloid | SLS | medium | borderline | SLS__00001__sp_Q05047_SLS1_CATRO |
| iochroma_cyaneum_IC10g022710.1 | Alkaloid | SLS | medium | borderline | SLS__00001__sp_Q05047_SLS1_CATRO |
| iochroma_cyaneum_IC10g034230.1 | Alkaloid | SLS | medium | borderline | SLS__00001__sp_Q05047_SLS1_CATRO |
| iochroma_cyaneum_IC10g034240.1 | Alkaloid | SLS | medium | borderline | SLS__00001__sp_Q05047_SLS1_CATRO |
| iochroma_cyaneum_IC10g034250.1 | Alkaloid | SLS | medium | borderline | SLS__00001__sp_Q05047_SLS1_CATRO |
| iochroma_cyaneum_IC10g034260.1 | Alkaloid | SLS | medium | borderline | SLS__00001__sp_Q05047_SLS1_CATRO |
| iochroma_cyaneum_IC10g034280.1 | Alkaloid | SLS | medium | borderline | SLS__00001__sp_Q05047_SLS1_CATRO |
| iochroma_cyaneum_scaffold20101s006070.1 | Alkaloid | SLS | medium | borderline | SLS__00002__sp_U5NDT8_SLS2_CATRO |
| iochroma_cyaneum_scaffold20317s005020.1 | Alkaloid | SLS | medium | borderline | SLS__00001__sp_Q05047_SLS1_CATRO |
| iochroma_cyaneum_scaffold20317s005050.1 | Alkaloid | SLS | medium | borderline | SLS__00001__sp_Q05047_SLS1_CATRO |
| iochroma_cyaneum_scaffold20317s005060.1 | Alkaloid | SLS | medium | borderline | SLS__00001__sp_Q05047_SLS1_CATRO |
| iochroma_cyaneum_scaffold20317s005070.1 | Alkaloid | SLS | medium | borderline | SLS__00001__sp_Q05047_SLS1_CATRO |
| iochroma_cyaneum_scaffold20317s005080.1 | Alkaloid | SLS | medium | borderline | SLS__00001__sp_Q05047_SLS1_CATRO |
| iochroma_cyaneum_scaffold20317s005090.1 | Alkaloid | SLS | medium | borderline | SLS__00001__sp_Q05047_SLS1_CATRO |
| iochroma_cyaneum_scaffold20317s005100.1 | Alkaloid | SLS | medium | borderline | SLS__00001__sp_Q05047_SLS1_CATRO |
| iochroma_cyaneum_scaffold20317s005110.1 | Alkaloid | SLS | medium | borderline | SLS__00001__sp_Q05047_SLS1_CATRO |
| iochroma_cyaneum_scaffold20317s005120.1 | Alkaloid | SLS | medium | borderline | SLS__00001__sp_Q05047_SLS1_CATRO |
| iochroma_cyaneum_scaffold20548s005060.1 | Alkaloid | SLS | medium | borderline | SLS__00001__sp_Q05047_SLS1_CATRO |
| iochroma_cyaneum_scaffold20548s005080.1 | Alkaloid | SLS | medium | borderline | SLS__00001__sp_Q05047_SLS1_CATRO |