PlantSME Plant secondary metabolism enzyme database

Ipomoea triloba (ipomoea_triloba)

Imported from atlas release summary for Ipomoea triloba.

2802
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Algae
Site group 29
Bryophytes
Site group 125
Lycophytes/Ferns
Site group 4
Gymnosperms
Site group 6
Basal angiosperms
Site group 13
Monocots
Site group 117
Eudicots
Current group 495
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
Terpenoid pathway 31.33% Alkaloid pathway 20.91% Phenylpropanoid pathway 18.84% Flavonoid pathway 12.88% Rosmarinic acid pathway 8.78% Steroid pathway 7.24%
Family Distribution
BAHD 6.52% C4H 5.95% C3'H/CYP98A 5.7% 4CL 4.93% UGT 4.31% 7DLGT 3.98% UFGT 3.88% CYP76 3.87%
Other Families 60.86%
More Families (96)
IFS 253 3.85% T3O 223 3.4% POD 202 3.08% DWF4/CYP90B1 159 2.42% F3H 154 2.35% CAD 152 2.31% NMT 150 2.28% BR6OX2/CYP85A2 125 1.9% F3'H/CYP75B 119 1.81% SMT1/SMT2/SMT3 117 1.78% STR 116 1.77% CODM/T6ODM 116 1.77% CAS 103 1.57% TPS 100 1.52% GES 97 1.48% TRI/TRII 86 1.31% CYP71 81 1.23% CSE 75 1.14% LAC 68 1.04% IFR 62 0.94% GS 56 0.85% CYP90D1 55 0.84% RAS 54 0.82% H6H 52 0.79% T16H 51 0.78% HCT 46 0.7% 7DLH 45 0.69% PMT 43 0.65% G8O/G8H 42 0.64% PYKS 41 0.62% 8HGO 41 0.62% IO 39 0.59% TAT 39 0.59% F3'5'H/CYP75A 37 0.56% ANR 37 0.56% COMT 36 0.55% FNS 35 0.53% BBE 34 0.52% SLS 32 0.49% F5H/CYP84A 32 0.49% SGD 31 0.47% PAL 30 0.46% CPD/CYP90A1 29 0.44% 16OMT 27 0.41% COR 23 0.35% LAMT 22 0.34% DFR 22 0.34% CCR 21 0.32% BR6OX1/CYP85A1 21 0.32% NCS 19 0.29% CPR 18 0.27% CYP80B1 17 0.26% ANS/LDOX 17 0.26% MPO 16 0.24% SQS/FDFT1 16 0.24% CYP51G1 16 0.24% MVK 15 0.23% FPPS 15 0.23% CHS 14 0.21% ROT3/CYP90C1 14 0.21% CCoAOMT 13 0.2% AACT 13 0.2% GGPPS 11 0.17% ISY 10 0.15% DXS 10 0.15% HMGR 10 0.15% CNMT 9 0.14% SQE 9 0.14% MVD 9 0.14% CYP719 8 0.12% HPPR 8 0.12% DET2 8 0.12% SMO1/SMO2 7 0.11% MCT/IspD 7 0.11% TYDC_DDC 6 0.09% TDC 4 0.06% CHI 4 0.06% CMK/IspE 4 0.06% PMK 4 0.06% HYD1 3 0.05% DWF7 3 0.05% FK 3 0.05% HDS/IspG 3 0.05% ODC 2 0.03% ADC 2 0.03% FLS 2 0.03% DWF1 2 0.03% CPI1 2 0.03% HDR/IspH 2 0.03% IDI 2 0.03% DXR 2 0.03% HMGS 2 0.03% XMT_MXMT_DXMT 1 0.02% 6OMT_4OMT_SOMT 1 0.02% DWF5 1 0.02% MDS/IspF 1 0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 878 19 BAHD (332) View species results
Alkaloid pathway 586 22 7DLGT (114) View species results
Phenylpropanoid pathway 528 11 POD (196) View species results
Flavonoid pathway 361 13 UFGT (241) View species results
Rosmarinic acid pathway 246 7 C4H (90) View species results
Steroid pathway 203 12 CAS (87) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 2417 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 528 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: XMT_MXMT_DXMT
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Gene Pathway Family Confidence Status Best Target
Itril13G0010700.1 Alkaloid XMT_MXMT_DXMT medium borderline XMT_MXMT_DXMT__00005__sp_A4GE69_XMT1_COFCA