PlantSME Plant secondary metabolism enzyme database

Jamesoniella autumnalis (jamesoniella_autumnalis)

Imported from atlas release summary for Jamesoniella autumnalis.

993
Candidate Protein Records
693
Pathway-Level Records
1885
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 171 20 BAHD (58) View species results
Alkaloid pathway 166 21 H6H (23) View species results
Phenylpropanoid pathway 163 11 POD (72) View species results
Flavonoid pathway 79 10 UFGT (29) View species results
Rosmarinic acid pathway 66 7 C4H (28) View species results
Steroid pathway 48 10 CAS (20) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 684 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 125 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
Jaut4953120169970 Flavonoid UFGT medium pass
Jaut4953120169980 Flavonoid UFGT medium pass
Jaut4956590178640 Flavonoid UFGT high pass
Jaut4965910193970 Flavonoid UFGT low borderline
Jaut4966940195540 Flavonoid UFGT low borderline
Jaut4972090203850 Flavonoid UFGT medium pass
Jaut4973310205820 Flavonoid UFGT medium pass
Jaut4977500211590 Flavonoid UFGT medium pass
Jaut5006810213350 Flavonoid UFGT medium pass
Jaut5006830213360 Flavonoid UFGT medium pass
Jaut4133240022730 Phenylpropanoid 4CL medium pass
Jaut4146280024500 Phenylpropanoid 4CL medium pass
Jaut4600340047660 Phenylpropanoid 4CL medium pass
Jaut4683010056950 Phenylpropanoid 4CL medium pass
Jaut4765860070330 Phenylpropanoid 4CL medium pass
Jaut4812690077510 Phenylpropanoid 4CL low borderline
Jaut4812720077540 Phenylpropanoid 4CL low borderline
Jaut4850580087040 Phenylpropanoid 4CL medium pass
Jaut4853760088770 Phenylpropanoid 4CL medium pass
Jaut4874170095870 Phenylpropanoid 4CL low borderline
Jaut4887780103230 Phenylpropanoid 4CL medium pass
Jaut4907230116770 Phenylpropanoid 4CL medium pass
Jaut4922170130170 Phenylpropanoid 4CL low borderline
Jaut4928450136620 Phenylpropanoid 4CL medium pass
Jaut4930670139090 Phenylpropanoid 4CL low borderline
Jaut4934900144390 Phenylpropanoid 4CL low borderline
Jaut4935510145410 Phenylpropanoid 4CL low borderline
Jaut4936920147180 Phenylpropanoid 4CL medium pass
Jaut4938150148710 Phenylpropanoid 4CL medium pass
Jaut4938390148920 Phenylpropanoid 4CL medium pass
Jaut4938900149560 Phenylpropanoid 4CL low borderline
Jaut4949360162850 Phenylpropanoid 4CL low borderline
Jaut4961390186320 Phenylpropanoid 4CL low borderline
Jaut4966950195600 Phenylpropanoid 4CL low borderline
Jaut4969660199860 Phenylpropanoid 4CL low borderline
Jaut4971810203390 Phenylpropanoid 4CL medium pass
Jaut4974470207540 Phenylpropanoid 4CL low borderline
Jaut4986760212900 Phenylpropanoid 4CL low borderline
Jaut4986770212920 Phenylpropanoid 4CL low borderline
Jaut605310220410 Phenylpropanoid 4CL medium pass
Jaut3254410004280 Phenylpropanoid C3'H/CYP98A low borderline
Jaut3274830005450 Phenylpropanoid C3'H/CYP98A low borderline
Jaut3337990009200 Phenylpropanoid C3'H/CYP98A low borderline
Jaut3743490015170 Phenylpropanoid C3'H/CYP98A low borderline
Jaut3754920015710 Phenylpropanoid C3'H/CYP98A low borderline
Jaut3754980015720 Phenylpropanoid C3'H/CYP98A low borderline
Jaut3777080017460 Phenylpropanoid C3'H/CYP98A low borderline
Jaut4152570025400 Phenylpropanoid C3'H/CYP98A medium borderline
Jaut4165590026910 Phenylpropanoid C3'H/CYP98A low borderline
Jaut4166580027060 Phenylpropanoid C3'H/CYP98A medium borderline