PlantSME Plant secondary metabolism enzyme database

Juglans cathayensis (juglans_cathayensis)

Imported from atlas release summary for Juglans cathayensis.

1439
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Algae
Site group 29
Bryophytes
Site group 125
Lycophytes/Ferns
Site group 4
Gymnosperms
Site group 6
Basal angiosperms
Site group 13
Monocots
Site group 117
Eudicots
Current group 495
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
Terpenoid pathway 27.45% Phenylpropanoid pathway 22.79% Alkaloid pathway 20.5% Flavonoid pathway 13.34% Rosmarinic acid pathway 9.66% Steroid pathway 6.25%
Family Distribution
C4H 6.08% C3'H/CYP98A 6.03% BAHD 5.44% 4CL 4.31% CYP76 4.09% IFS 3.76% UGT 3.59% POD 3.57%
Other Families 63.13%
More Families (95)
T3O 126 3.48% UFGT 116 3.21% F3H 115 3.18% 7DLGT 114 3.15% DWF4/CYP90B1 86 2.38% NMT 81 2.24% H6H 70 1.93% BR6OX2/CYP85A2 68 1.88% CAD 66 1.82% F3'H/CYP75B 65 1.8% CODM/T6ODM 57 1.58% LAC 57 1.58% SMT1/SMT2/SMT3 57 1.58% STR 56 1.55% TRI/TRII 44 1.22% CYP71 43 1.19% CAS 38 1.05% GS 37 1.02% PYKS 36 1.0% HCT 36 1.0% BBE 34 0.94% COMT 33 0.91% IFR 32 0.88% CSE 32 0.88% CYP90D1 32 0.88% FNS 31 0.86% TAT 30 0.83% TPS 29 0.8% G8O/G8H 28 0.77% GES 28 0.77% IO 27 0.75% SGD 27 0.75% SLS 26 0.72% T16H 25 0.69% PAL 24 0.66% ANR 23 0.64% 8HGO 22 0.61% F3'5'H/CYP75A 21 0.58% CCR 21 0.58% RAS 21 0.58% 16OMT 18 0.5% CPD/CYP90A1 17 0.47% NCS 16 0.44% LAMT 16 0.44% F5H/CYP84A 16 0.44% PMT 15 0.41% 7DLH 14 0.39% BR6OX1/CYP85A1 14 0.39% CHS 13 0.36% CPR 12 0.33% ROT3/CYP90C1 11 0.3% CYP719 10 0.28% ANS/LDOX 10 0.28% SQE 10 0.28% GGPPS 10 0.28% CYP80B1 9 0.25% COR 9 0.25% DFR 8 0.22% CCoAOMT 8 0.22% DXS 8 0.22% CNMT 7 0.19% MPO 7 0.19% CYP51G1 7 0.19% FPPS 7 0.19% ISY 6 0.17% MVK 6 0.17% AACT 6 0.17% HPPR 5 0.14% DET2 5 0.14% SQS/FDFT1 5 0.14% HDR/IspH 5 0.14% MVD 5 0.14% 6OMT_4OMT_SOMT 4 0.11% TYDC_DDC 4 0.11% FLS 4 0.11% CHI 4 0.11% DWF7 4 0.11% CPI1 4 0.11% GPPS 4 0.11% SMO1/SMO2 3 0.08% PMK 3 0.08% HMGR 3 0.08% XMT_MXMT_DXMT 2 0.06% ADC 2 0.06% HYD1 2 0.06% HMGS 2 0.06% MCT/IspD 2 0.06% ODC 1 0.03% TDC 1 0.03% DWF5 1 0.03% FK 1 0.03% DXR 1 0.03% MDS/IspF 1 0.03% HDS/IspG 1 0.03% CMK/IspE 1 0.03%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 395 18 BAHD (146) View species results
Phenylpropanoid pathway 328 12 POD (119) View species results
Alkaloid pathway 295 23 7DLGT (44) View species results
Flavonoid pathway 192 14 UFGT (109) View species results
Rosmarinic acid pathway 139 7 C4H (46) View species results
Steroid pathway 90 10 CAS (34) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 1367 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 254 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: GGPPS
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Gene Pathway Family Confidence Status Best Target
Jcat01G0003460 Terpenoid GGPPS medium borderline GGPPS__00002__sp_Q9SLG2_GGPP4_ARATH
Jcat03G0009100 Terpenoid GGPPS medium borderline GGPPS__00002__sp_Q9SLG2_GGPP4_ARATH
Jcat09G0011000 Terpenoid GGPPS medium borderline GGPPS__00001__sp_Q8S948_SPS1_ARATH
Jcat09G0011270 Terpenoid GGPPS medium borderline GGPPS__00001__sp_Q8S948_SPS1_ARATH
Jcat11G0009270 Terpenoid GGPPS medium borderline GGPPS__00002__sp_Q9SLG2_GGPP4_ARATH
Jcat11G0009290 Terpenoid GGPPS medium borderline GGPPS__00002__sp_Q9SLG2_GGPP4_ARATH
Jcat11G0024780 Terpenoid GGPPS medium borderline GGPPS__00002__sp_Q9SLG2_GGPP4_ARATH
Jcat12G0007410 Terpenoid GGPPS medium borderline GGPPS__00001__sp_Q8S948_SPS1_ARATH
Jcat13G0010480 Terpenoid GGPPS medium borderline GGPPS__00002__sp_Q9SLG2_GGPP4_ARATH
Jcat15G0018110 Terpenoid GGPPS medium borderline GGPPS__00002__sp_Q9SLG2_GGPP4_ARATH