Juglans cinerea (juglans_cinerea)

This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.

Pathway Coverage

6 Pathways

Terpenoid pathway 30.0% Alkaloid pathway 21.83% Phenylpropanoid pathway 20.74% Flavonoid pathway 13.49% Rosmarinic acid pathway 7.83% Steroid pathway 6.11%

Family Distribution

1750 Candidate Genes

C4H 6.3% BAHD 5.56% C3'H/CYP98A 5.2% CYP76 4.19% UGT 4.1% 4CL 3.71% 7DLGT 3.57% POD 3.53%

Other Families 63.85%

More Families (98)

IFS 148 3.39% UFGT 147 3.37% F3H 134 3.07% T3O 113 2.59% DWF4/CYP90B1 108 2.47% NMT 102 2.34% F3'H/CYP75B 77 1.76% BR6OX2/CYP85A2 75 1.72% CAD 74 1.69% CODM/T6ODM 73 1.67% STR 71 1.63% H6H 69 1.58% TRI/TRII 64 1.47% SMT1/SMT2/SMT3 63 1.44% LAC 62 1.42% HCT 53 1.21% G8O/G8H 51 1.17% T16H 49 1.12% COMT 49 1.12% TPS 49 1.12% CAS 48 1.1% FNS 47 1.08% PYKS 44 1.01% GS 43 0.98% GES 41 0.94% TAT 37 0.85% CYP71 37 0.85% F3'5'H/CYP75A 36 0.82% IFR 36 0.82% F5H/CYP84A 36 0.82% CYP90D1 35 0.8% IO 32 0.73% 7DLH 31 0.71% LAMT 30 0.69% PAL 30 0.69% RAS 30 0.69% ANR 28 0.64% PMT 27 0.62% SLS 26 0.6% NCS 26 0.6% 16OMT 25 0.57% CCR 25 0.57% SGD 24 0.55% CPD/CYP90A1 24 0.55% CSE 23 0.53% COR 20 0.46% 8HGO 18 0.41% BR6OX1/CYP85A1 18 0.41% CNMT 16 0.37% CPR 16 0.37% CHS 14 0.32% DFR 14 0.32% ROT3/CYP90C1 14 0.32% CYP80B1 13 0.3% ISY 12 0.27% CYP719 10 0.23% SQE 10 0.23% FPPS 10 0.23% ANS/LDOX 9 0.21% CCoAOMT 8 0.18% SQS/FDFT1 8 0.18% GGPPS 8 0.18% DXS 8 0.18% MPO 7 0.16% AACT 7 0.16% TYDC_DDC 6 0.14% HPPR 6 0.14% CYP51G1 6 0.14% MVD 6 0.14% DET2 5 0.11% MVK 5 0.11% SMO1/SMO2 4 0.09% CPI1 4 0.09% TDC 3 0.07% 6OMT_4OMT_SOMT 3 0.07% ODC 3 0.07% CHI 3 0.07% FK 3 0.07% DWF7 3 0.07% PMK 3 0.07% HMGS 3 0.07% DXR 3 0.07% HMGR 3 0.07% BBE 2 0.05% ADC 2 0.05% XMT_MXMT_DXMT 2 0.05% FLS 2 0.05% DWF1 2 0.05% HYD1 2 0.05% MCT/IspD 2 0.05% MDS/IspF 2 0.05% HDR/IspH 2 0.05% IDI 2 0.05% CYP80F1 1 0.02% DWF5 1 0.02% HDS/IspG 1 0.02% CMK/IspE 1 0.02% GPPS 1 0.02%

Species Pathway Results

The links below show identification results for this species within each pathway, instead of opening the global pathway overview.

Pathway	Candidate Genes	Families	Top family	Results
Terpenoid pathway	525	18	BAHD (191)	View species results
Alkaloid pathway	382	24	7DLGT (63)	View species results
Phenylpropanoid pathway	363	12	POD (138)	View species results
Flavonoid pathway	236	11	UFGT (142)	View species results
Rosmarinic acid pathway	137	7	4CL (37)	View species results
Steroid pathway	107	11	SMT1/SMT2/SMT3 (43)	View species results

Broad Catalytic Groups

P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.

Catalytic group	Families	Candidate genes	Included families
P450/oxygenase	24	1625	7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase	3	326	BAHD, HCT, RAS

Identification Result List

Search the public identification results for this species; click pathway or family legends above to narrow within this species.

Current family filter: CAD

Gene	Pathway	Family	Confidence	Status	Best Target
juglans_cinerea_g33091.t1	Phenylpropanoid	CAD	medium	pass	CAD__00002__sp_A0A0U4AHM6_CAD2_RAUSE
juglans_cinerea_g33099.t1	Phenylpropanoid	CAD	medium	pass	CAD__00009__sp_P42734_CADH9_ARATH
juglans_cinerea_g33559.t1	Phenylpropanoid	CAD	medium	pass	CAD__00002__sp_A0A0U4AHM6_CAD2_RAUSE
juglans_cinerea_g33561.t1	Phenylpropanoid	CAD	medium	pass	CAD__00002__sp_A0A0U4AHM6_CAD2_RAUSE
juglans_cinerea_g33562.t1	Phenylpropanoid	CAD	medium	pass	CAD__00002__sp_A0A0U4AHM6_CAD2_RAUSE
juglans_cinerea_g3375.t1	Phenylpropanoid	CAD	low	borderline	CAD__00004__sp_B5LAT8_CAD1_CAPAN
juglans_cinerea_g33815.t1	Phenylpropanoid	CAD	low	borderline	CAD__00006__sp_I1ZHA5_CAD_CHAFM
juglans_cinerea_g34604.t1	Phenylpropanoid	CAD	medium	borderline	CAD__00005__sp_G7IYC1_CAD2_MEDTR
juglans_cinerea_g34605.t1	Phenylpropanoid	CAD	medium	borderline	CAD__00005__sp_G7IYC1_CAD2_MEDTR
juglans_cinerea_g35541.t1	Phenylpropanoid	CAD	medium	pass	CAD__00014__sp_Q2KNL5_CADH1_OCIBA
juglans_cinerea_g35687.t1	Phenylpropanoid	CAD	medium	borderline	CAD__00005__sp_G7IYC1_CAD2_MEDTR
juglans_cinerea_g37865.t1	Phenylpropanoid	CAD	low	borderline	CAD__00011__sp_Q02971_CADH7_ARATH
juglans_cinerea_g37866.t1	Phenylpropanoid	CAD	low	borderline	CAD__00011__sp_Q02971_CADH7_ARATH
juglans_cinerea_g3802.t1	Phenylpropanoid	CAD	medium	borderline	CAD__00005__sp_G7IYC1_CAD2_MEDTR
juglans_cinerea_g5544.t1	Phenylpropanoid	CAD	medium	pass	CAD__00002__sp_A0A0U4AHM6_CAD2_RAUSE
juglans_cinerea_g5545.t1	Phenylpropanoid	CAD	medium	pass	CAD__00002__sp_A0A0U4AHM6_CAD2_RAUSE
juglans_cinerea_g5546.t1	Phenylpropanoid	CAD	medium	pass	CAD__00002__sp_A0A0U4AHM6_CAD2_RAUSE
juglans_cinerea_g6023.t1	Phenylpropanoid	CAD	low	borderline	CAD__00006__sp_I1ZHA5_CAD_CHAFM
juglans_cinerea_g6319.t1	Phenylpropanoid	CAD	medium	pass	CAD__00002__sp_A0A0U4AHM6_CAD2_RAUSE
juglans_cinerea_g6320.t1	Phenylpropanoid	CAD	medium	pass	CAD__00004__sp_B5LAT8_CAD1_CAPAN
juglans_cinerea_g6522.t1	Phenylpropanoid	CAD	medium	pass	CAD__00009__sp_P42734_CADH9_ARATH
juglans_cinerea_g693.t1	Phenylpropanoid	CAD	low	borderline	CAD__00006__sp_I1ZHA5_CAD_CHAFM
juglans_cinerea_g695.t1	Phenylpropanoid	CAD	low	borderline	CAD__00006__sp_I1ZHA5_CAD_CHAFM
juglans_cinerea_g7760.t1	Phenylpropanoid	CAD	medium	borderline	CAD__00005__sp_G7IYC1_CAD2_MEDTR