PlantSME Plant secondary metabolism enzyme database

Juglans hindsii (juglans_hindsii)

Imported from atlas release summary for Juglans hindsii.

1579
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Algae
Site group 29
Bryophytes
Site group 125
Lycophytes/Ferns
Site group 4
Gymnosperms
Site group 6
Basal angiosperms
Site group 13
Monocots
Site group 117
Eudicots
Current group 495
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
Terpenoid pathway 28.63% Phenylpropanoid pathway 21.6% Alkaloid pathway 21.47% Flavonoid pathway 13.36% Rosmarinic acid pathway 9.06% Steroid pathway 5.89%
Family Distribution
C4H 6.21% C3'H/CYP98A 6.11% BAHD 5.01% UGT 4.38% IFS 4.36% CYP76 4.03% 7DLGT 3.88% 4CL 3.76%
Other Families 62.25%
More Families (97)
UFGT 148 3.71% POD 142 3.56% T3O 132 3.31% F3H 123 3.08% NMT 89 2.23% DWF4/CYP90B1 83 2.08% BR6OX2/CYP85A2 81 2.03% STR 72 1.8% CODM/T6ODM 70 1.75% H6H 67 1.68% F3'H/CYP75B 62 1.55% CAD 62 1.55% SMT1/SMT2/SMT3 56 1.4% LAC 53 1.33% COMT 50 1.25% CAS 48 1.2% CYP71 47 1.18% TRI/TRII 44 1.1% PYKS 40 1.0% HCT 40 1.0% TPS 40 1.0% CSE 39 0.98% T16H 37 0.93% CYP90D1 37 0.93% GES 34 0.85% IFR 34 0.85% IO 33 0.83% GS 31 0.78% SGD 30 0.75% 16OMT 29 0.73% G8O/G8H 28 0.7% TAT 27 0.68% BBE 25 0.63% PMT 24 0.6% ANR 22 0.55% FNS 21 0.53% PAL 21 0.53% RAS 21 0.53% LAMT 20 0.5% 7DLH 20 0.5% NCS 20 0.5% SLS 20 0.5% CPD/CYP90A1 20 0.5% BR6OX1/CYP85A1 20 0.5% F3'5'H/CYP75A 18 0.45% CCR 18 0.45% F5H/CYP84A 16 0.4% ANS/LDOX 14 0.35% DFR 14 0.35% COR 13 0.33% ROT3/CYP90C1 13 0.33% CHS 12 0.3% CPR 12 0.3% CYP719 11 0.28% 8HGO 11 0.28% SQE 10 0.25% CNMT 9 0.23% CCoAOMT 9 0.23% GGPPS 9 0.23% AACT 9 0.23% MPO 8 0.2% SQS/FDFT1 8 0.2% ISY 7 0.18% 6OMT_4OMT_SOMT 7 0.18% CYP51G1 7 0.18% MVD 7 0.18% CYP80B1 6 0.15% FPPS 6 0.15% HPPR 5 0.13% DET2 5 0.13% MVK 5 0.13% DXS 5 0.13% CHI 4 0.1% CPI1 4 0.1% SMO1/SMO2 4 0.1% TDC 3 0.08% PMK 3 0.08% HMGR 3 0.08% TYDC_DDC 2 0.05% ADC 2 0.05% DWF5 2 0.05% DWF7 2 0.05% HDR/IspH 2 0.05% MCT/IspD 2 0.05% GPPS 2 0.05% MDS/IspF 2 0.05% HMGS 2 0.05% XMT_MXMT_DXMT 1 0.03% ODC 1 0.03% FLS 1 0.03% DWF1 1 0.03% HYD1 1 0.03% FK 1 0.03% IDI 1 0.03% DXR 1 0.03% HDS/IspG 1 0.03% CMK/IspE 1 0.03%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 452 19 UGT (161) View species results
Phenylpropanoid pathway 341 11 POD (130) View species results
Alkaloid pathway 339 22 7DLGT (70) View species results
Flavonoid pathway 211 9 UFGT (133) View species results
Rosmarinic acid pathway 143 7 C4H (63) View species results
Steroid pathway 93 11 CAS (37) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 1518 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 261 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: STR
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Gene Pathway Family Confidence Status Best Target
Jhin10G0000740 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
Jhin10G0002370 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
Jhin11G0013050 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
Jhin11G0024210 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
Jhin11G0024250 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
Jhin11G0028600 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
Jhin12G0007990 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
Jhin13G0007690 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
Jhin13G0014460 Alkaloid STR medium pass STR__00003__sp_Q9M1B4_SSL13_ARATH
Jhin13G0014490 Alkaloid STR medium pass STR__00003__sp_Q9M1B4_SSL13_ARATH
Jhin13G0018020 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
Jhin13G0018580 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
Jhin14G0003250 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
Jhin14G0012070 Alkaloid STR medium pass STR__00003__sp_Q9M1B4_SSL13_ARATH
Jhin14G0012080 Alkaloid STR medium pass STR__00003__sp_Q9M1B4_SSL13_ARATH
Jhin14G0015600 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
Jhin14G0015610 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
Jhin15G0001990 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
Jhin15G0013720 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
Jhin15G0019060 Alkaloid STR medium pass STR__00001__sp_D3GE74_STR1_MEDTR
Jhin16G0009510 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
Jhin16G0011960 Alkaloid STR medium pass STR__00001__sp_D3GE74_STR1_MEDTR