PlantSME Plant secondary metabolism enzyme database

Juglans hindsii (juglans_hindsii)

Imported from atlas release summary for Juglans hindsii.

1899
Candidate Protein Records
1579
Pathway-Level Records
3992
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Algae
Site group 29
Bryophytes
Site group 125
Lycophytes/Ferns
Site group 4
Gymnosperms
Site group 6
Basal angiosperms
Site group 13
Monocots
Site group 117
Eudicots
Current group 495
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Pathway Coverage
Terpenoid pathway 28.63% Phenylpropanoid pathway 21.6% Alkaloid pathway 21.47% Flavonoid pathway 13.36% Rosmarinic acid pathway 9.06% Steroid pathway 5.89%
Family Distribution
C4H 6.21% C3'H/CYP98A 6.11% BAHD 5.01% UGT 4.38% IFS 4.36% CYP76 4.03% 7DLGT 3.88% 4CL 3.76%
Other Families 62.25%
More Families (97)
UFGT 148 3.71% POD 142 3.56% T3O 132 3.31% F3H 123 3.08% NMT 89 2.23% DWF4/CYP90B1 83 2.08% BR6OX2/CYP85A2 81 2.03% STR 72 1.8% CODM/T6ODM 70 1.75% H6H 67 1.68% F3'H/CYP75B 62 1.55% CAD 62 1.55% SMT1/SMT2/SMT3 56 1.4% LAC 53 1.33% COMT 50 1.25% CAS 48 1.2% CYP71 47 1.18% TRI/TRII 44 1.1% PYKS 40 1.0% HCT 40 1.0% TPS 40 1.0% CSE 39 0.98% T16H 37 0.93% CYP90D1 37 0.93% GES 34 0.85% IFR 34 0.85% IO 33 0.83% GS 31 0.78% SGD 30 0.75% 16OMT 29 0.73% G8O/G8H 28 0.7% TAT 27 0.68% BBE 25 0.63% PMT 24 0.6% ANR 22 0.55% FNS 21 0.53% PAL 21 0.53% RAS 21 0.53% LAMT 20 0.5% 7DLH 20 0.5% NCS 20 0.5% SLS 20 0.5% CPD/CYP90A1 20 0.5% BR6OX1/CYP85A1 20 0.5% F3'5'H/CYP75A 18 0.45% CCR 18 0.45% F5H/CYP84A 16 0.4% ANS/LDOX 14 0.35% DFR 14 0.35% COR 13 0.33% ROT3/CYP90C1 13 0.33% CHS 12 0.3% CPR 12 0.3% CYP719 11 0.28% 8HGO 11 0.28% SQE 10 0.25% CNMT 9 0.23% CCoAOMT 9 0.23% GGPPS 9 0.23% AACT 9 0.23% MPO 8 0.2% SQS/FDFT1 8 0.2% ISY 7 0.18% 6OMT_4OMT_SOMT 7 0.18% CYP51G1 7 0.18% MVD 7 0.18% CYP80B1 6 0.15% FPPS 6 0.15% HPPR 5 0.13% DET2 5 0.13% MVK 5 0.13% DXS 5 0.13% CHI 4 0.1% CPI1 4 0.1% SMO1/SMO2 4 0.1% TDC 3 0.08% PMK 3 0.08% HMGR 3 0.08% TYDC_DDC 2 0.05% ADC 2 0.05% DWF5 2 0.05% DWF7 2 0.05% HDR/IspH 2 0.05% MCT/IspD 2 0.05% GPPS 2 0.05% MDS/IspF 2 0.05% HMGS 2 0.05% XMT_MXMT_DXMT 1 0.03% ODC 1 0.03% FLS 1 0.03% DWF1 1 0.03% HYD1 1 0.03% FK 1 0.03% IDI 1 0.03% DXR 1 0.03% HDS/IspG 1 0.03% CMK/IspE 1 0.03%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 452 19 UGT (161) View species results
Phenylpropanoid pathway 341 11 POD (130) View species results
Alkaloid pathway 339 22 7DLGT (70) View species results
Flavonoid pathway 211 9 UFGT (133) View species results
Rosmarinic acid pathway 143 7 C4H (63) View species results
Steroid pathway 93 11 CAS (37) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 1518 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 261 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: ROT3/CYP90C1
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Protein/Isoform Record Pathway Family Confidence Status Best Target
Jhin03G0008350 Steroid ROT3/CYP90C1 medium borderline ROT3_CYP90C1__00001__sp_Q9M066_C90C1_ARATH
Jhin07G0005870 Steroid ROT3/CYP90C1 medium borderline ROT3_CYP90C1__00001__sp_Q9M066_C90C1_ARATH
Jhin07G0006210 Steroid ROT3/CYP90C1 medium borderline ROT3_CYP90C1__00001__sp_Q9M066_C90C1_ARATH
Jhin07G0006420 Steroid ROT3/CYP90C1 medium borderline ROT3_CYP90C1__00001__sp_Q9M066_C90C1_ARATH
Jhin08G0005690 Steroid ROT3/CYP90C1 medium borderline ROT3_CYP90C1__00001__sp_Q9M066_C90C1_ARATH
Jhin09G0021120 Steroid ROT3/CYP90C1 medium borderline ROT3_CYP90C1__00001__sp_Q9M066_C90C1_ARATH
Jhin11G0014870 Steroid ROT3/CYP90C1 medium borderline ROT3_CYP90C1__00001__sp_Q9M066_C90C1_ARATH
Jhin11G0021780 Steroid ROT3/CYP90C1 medium borderline ROT3_CYP90C1__00001__sp_Q9M066_C90C1_ARATH
Jhin11G0022350 Steroid ROT3/CYP90C1 medium borderline ROT3_CYP90C1__00001__sp_Q9M066_C90C1_ARATH
Jhin13G0002100 Steroid ROT3/CYP90C1 medium borderline ROT3_CYP90C1__00001__sp_Q9M066_C90C1_ARATH
Jhin14G0001600 Steroid ROT3/CYP90C1 medium borderline ROT3_CYP90C1__00001__sp_Q9M066_C90C1_ARATH
Jhin14G0005280 Steroid ROT3/CYP90C1 medium borderline ROT3_CYP90C1__00001__sp_Q9M066_C90C1_ARATH
Jhin16G0011100 Steroid ROT3/CYP90C1 medium borderline ROT3_CYP90C1__00001__sp_Q9M066_C90C1_ARATH