PlantSME Plant secondary metabolism enzyme database

Juglans sigillata (juglans_sigillata)

Imported from atlas release summary for Juglans sigillata.

1720
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Algae
Site group 29
Bryophytes
Site group 125
Lycophytes/Ferns
Site group 4
Gymnosperms
Site group 6
Basal angiosperms
Site group 13
Monocots
Site group 117
Eudicots
Current group 495
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
Terpenoid pathway 28.78% Alkaloid pathway 20.99% Phenylpropanoid pathway 20.29% Flavonoid pathway 14.3% Rosmarinic acid pathway 10.23% Steroid pathway 5.41%
Family Distribution
C4H 6.92% C3'H/CYP98A 6.6% BAHD 4.86% IFS 4.61% CYP76 4.59% UGT 4.18% 7DLGT 3.86% UFGT 3.81%
Other Families 60.58%
More Families (95)
T3O 161 3.67% F3H 144 3.29% POD 131 2.99% 4CL 129 2.94% DWF4/CYP90B1 117 2.67% BR6OX2/CYP85A2 95 2.17% CODM/T6ODM 85 1.94% F3'H/CYP75B 81 1.85% NMT 74 1.69% H6H 73 1.67% STR 72 1.64% HCT 58 1.32% CAD 57 1.3% TRI/TRII 56 1.28% SMT1/SMT2/SMT3 51 1.16% CYP71 51 1.16% CYP90D1 50 1.14% LAC 48 1.1% CAS 48 1.1% IO 47 1.07% PYKS 45 1.03% COMT 45 1.03% T16H 42 0.96% CSE 38 0.87% TPS 38 0.87% G8O/G8H 37 0.84% GS 36 0.82% TAT 34 0.78% PMT 33 0.75% GES 33 0.75% IFR 30 0.68% RAS 29 0.66% FNS 28 0.64% SGD 26 0.59% 16OMT 25 0.57% SLS 25 0.57% F3'5'H/CYP75A 25 0.57% PAL 24 0.55% 7DLH 22 0.5% NCS 22 0.5% ANR 19 0.43% CPD/CYP90A1 19 0.43% F5H/CYP84A 18 0.41% CNMT 16 0.37% CHS 16 0.37% CCR 15 0.34% BR6OX1/CYP85A1 15 0.34% LAMT 14 0.32% COR 14 0.32% ROT3/CYP90C1 13 0.3% CYP719 12 0.27% CPR 12 0.27% 8HGO 11 0.25% ANS/LDOX 11 0.25% FPPS 11 0.25% GGPPS 11 0.25% CYP80B1 10 0.23% CCoAOMT 10 0.23% DFR 9 0.21% SQE 9 0.21% MPO 8 0.18% CYP51G1 8 0.18% ISY 7 0.16% HPPR 7 0.16% MVK 7 0.16% TYDC_DDC 6 0.14% MVD 6 0.14% SMO1/SMO2 5 0.11% DET2 5 0.11% CPI1 5 0.11% AACT 5 0.11% DXS 5 0.11% 6OMT_4OMT_SOMT 4 0.09% SQS/FDFT1 4 0.09% CHI 3 0.07% DWF7 3 0.07% HMGR 3 0.07% CMK/IspE 3 0.07% HMGS 3 0.07% TDC 2 0.05% ODC 2 0.05% BBE 2 0.05% ADC 2 0.05% DWF5 2 0.05% FK 2 0.05% IDI 2 0.05% MCT/IspD 2 0.05% PMK 2 0.05% MDS/IspF 2 0.05% HDR/IspH 2 0.05% XMT_MXMT_DXMT 1 0.02% FLS 1 0.02% DWF1 1 0.02% HYD1 1 0.02% DXR 1 0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 495 17 BAHD (174) View species results
Alkaloid pathway 361 24 7DLGT (74) View species results
Phenylpropanoid pathway 349 12 POD (123) View species results
Flavonoid pathway 246 12 UFGT (162) View species results
Rosmarinic acid pathway 176 7 C4H (85) View species results
Steroid pathway 93 10 SMT1/SMT2/SMT3 (37) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 1843 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 300 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: FPPS
Reset
Gene Pathway Family Confidence Status Best Target
JsigC6501430006230.1 Terpenoid FPPS medium pass FPPS__00008__sp_Q4JHN6_FPS_PANGI
JsigC6535310013190.1 Terpenoid FPPS medium pass FPPS__00008__sp_Q4JHN6_FPS_PANGI
Jsigscaffold15210048010.1 Terpenoid FPPS medium pass FPPS__00008__sp_Q4JHN6_FPS_PANGI
Jsigscaffold19060062150.1 Terpenoid FPPS low borderline FPPS__00002__sp_K7W9N9_CPT6_SOLLC
Jsigscaffold19070062470.2 Terpenoid FPPS medium pass FPPS__00002__sp_K7W9N9_CPT6_SOLLC
Jsigscaffold21150070000.1 Terpenoid FPPS medium pass FPPS__00008__sp_Q4JHN6_FPS_PANGI
Jsigscaffold28420098190.1 Terpenoid FPPS medium borderline FPPS__00005__sp_P34802_GGPP1_ARATH
Jsigscaffold28530098280.1 Terpenoid FPPS medium borderline FPPS__00005__sp_P34802_GGPP1_ARATH
Jsigscaffold35040125870.1 Terpenoid FPPS medium pass FPPS__00008__sp_Q4JHN6_FPS_PANGI
Jsigscaffold71480220430.1 Terpenoid FPPS low borderline FPPS__00007__sp_P80042_GGPPS_CAPAN
Jsigscaffold77360229550.1 Terpenoid FPPS medium pass FPPS__00002__sp_K7W9N9_CPT6_SOLLC