PlantSME Plant secondary metabolism enzyme database

Kindbergia praelongum (kindbergia_praelongum)

Imported from atlas release summary for Kindbergia praelongum.

848
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Algae
Site group 29
Bryophytes
Current group 125
Lycophytes/Ferns
Site group 4
Gymnosperms
Site group 6
Basal angiosperms
Site group 13
Monocots
Site group 117
Eudicots
Site group 495
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
Phenylpropanoid pathway 25.47% Terpenoid pathway 23.82% Alkaloid pathway 19.34% Flavonoid pathway 12.74% Rosmarinic acid pathway 12.38% Steroid pathway 6.25%
Family Distribution
C4H 7.66% C3'H/CYP98A 6.76% CYP76 5.45% POD 4.86% BAHD 4.23% IFS 3.87% 4CL 3.78% NMT 3.51%
Other Families 59.86%
More Families (96)
PAL 75 3.38% DWF4/CYP90B1 69 3.11% T3O 59 2.66% BR6OX2/CYP85A2 55 2.48% F3'H/CYP75B 52 2.34% F3H 49 2.21% IO 44 1.98% PYKS 39 1.76% STR 36 1.62% GS 36 1.62% UGT 36 1.62% IFR 35 1.58% 7DLGT 34 1.53% CODM/T6ODM 31 1.4% F3'5'H/CYP75A 29 1.31% CHS 29 1.31% UFGT 29 1.31% CAS 27 1.22% COMT 25 1.13% H6H 23 1.04% CAD 22 0.99% SMT1/SMT2/SMT3 21 0.95% SLS 19 0.86% CYP90D1 19 0.86% TRI/TRII 18 0.81% G8O/G8H 18 0.81% CYP80B1 17 0.77% CSE 17 0.77% CYP71 16 0.72% 16OMT 15 0.68% T16H 15 0.68% LAMT 15 0.68% 7DLH 14 0.63% NCS 14 0.63% HCT 12 0.54% RAS 11 0.5% DWF5 11 0.5% FNS 10 0.45% LAC 10 0.45% SGD 9 0.41% 8HGO 9 0.41% BBE 8 0.36% F5H/CYP84A 8 0.36% ROT3/CYP90C1 8 0.36% TPS 8 0.36% MPO 7 0.32% COR 7 0.32% ANR 7 0.32% CPD/CYP90A1 7 0.32% AACT 7 0.32% PMT 6 0.27% CNMT 6 0.27% TDC 6 0.27% CCR 6 0.27% TAT 6 0.27% SQS/FDFT1 6 0.27% GGPPS 6 0.27% TYDC_DDC 5 0.23% GES 4 0.18% CHI 4 0.18% DFR 4 0.18% CPR 4 0.18% BR6OX1/CYP85A1 4 0.18% SQE 4 0.18% DET2 4 0.18% CYP719 3 0.14% ADC 3 0.14% ANS/LDOX 3 0.14% FLS 3 0.14% CYP51G1 3 0.14% HYD1 3 0.14% HDR/IspH 3 0.14% MVD 3 0.14% MVK 3 0.14% MCT/IspD 3 0.14% HDS/IspG 3 0.14% FPPS 3 0.14% HMGS 3 0.14% ISY 2 0.09% CCoAOMT 2 0.09% HPPR 2 0.09% SMO1/SMO2 2 0.09% DXR 2 0.09% CMK/IspE 2 0.09% XMT_MXMT_DXMT 1 0.05% CYP80F1 1 0.05% ODC 1 0.05% 6OMT_4OMT_SOMT 1 0.05% DWF7 1 0.05% FK 1 0.05% DWF1 1 0.05% CPI1 1 0.05% PMK 1 0.05% HMGR 1 0.05% IDI 1 0.05% DXS 1 0.05%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 216 11 POD (102) View species results
Terpenoid pathway 202 19 CYP76 (70) View species results
Alkaloid pathway 164 21 NMT (34) View species results
Flavonoid pathway 108 9 CHS (29) View species results
Rosmarinic acid pathway 105 7 C4H (51) View species results
Steroid pathway 53 12 CAS (25) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 987 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 117 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: H6H
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Gene Pathway Family Confidence Status
Kpra1619030003770 Alkaloid H6H medium borderline
Kpra1636480008610 Alkaloid H6H low borderline
Kpra1709870020490 Alkaloid H6H medium borderline
Kpra1713090022460 Alkaloid H6H medium pass
Kpra1733770028640 Alkaloid H6H low borderline
Kpra1946940037240 Alkaloid H6H low borderline
Kpra1972910055210 Alkaloid H6H low borderline
Kpra1977540061990 Alkaloid H6H medium borderline
Kpra1982250068950 Alkaloid H6H low borderline
Kpra1982970069780 Alkaloid H6H medium borderline
Kpra2011190094130 Alkaloid H6H medium borderline
Kpra2135200101970 Alkaloid H6H medium pass
Kpra2263300117940 Alkaloid H6H low borderline
Kpra2270440122500 Alkaloid H6H medium borderline
Kpra2366510134460 Alkaloid H6H medium borderline
Kpra2404300162530 Alkaloid H6H low borderline
Kpra2428230181090 Alkaloid H6H low borderline
Kpra2428230181110 Alkaloid H6H medium pass
Kpra2461340185460 Alkaloid H6H low borderline
Kpra2503550205480 Alkaloid H6H low borderline
Kpra2529850233450 Alkaloid H6H medium borderline
Kpra2532850237180 Alkaloid H6H medium borderline
Kpra2575630278110 Alkaloid H6H medium borderline