PlantSME Plant secondary metabolism enzyme database

Kindbergia praelongum (kindbergia_praelongum)

Imported from atlas release summary for Kindbergia praelongum.

1087
Candidate Protein Records
848
Pathway-Level Records
2220
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Algae
Site group 29
Bryophytes
Current group 125
Lycophytes/Ferns
Site group 4
Gymnosperms
Site group 6
Basal angiosperms
Site group 13
Monocots
Site group 117
Eudicots
Site group 495
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Pathway Coverage
Phenylpropanoid pathway 25.47% Terpenoid pathway 23.82% Alkaloid pathway 19.34% Flavonoid pathway 12.74% Rosmarinic acid pathway 12.38% Steroid pathway 6.25%
Family Distribution
C4H 7.66% C3'H/CYP98A 6.76% CYP76 5.45% POD 4.86% BAHD 4.23% IFS 3.87% 4CL 3.78% NMT 3.51%
Other Families 59.86%
More Families (96)
PAL 75 3.38% DWF4/CYP90B1 69 3.11% T3O 59 2.66% BR6OX2/CYP85A2 55 2.48% F3'H/CYP75B 52 2.34% F3H 49 2.21% IO 44 1.98% PYKS 39 1.76% STR 36 1.62% GS 36 1.62% UGT 36 1.62% IFR 35 1.58% 7DLGT 34 1.53% CODM/T6ODM 31 1.4% F3'5'H/CYP75A 29 1.31% CHS 29 1.31% UFGT 29 1.31% CAS 27 1.22% COMT 25 1.13% H6H 23 1.04% CAD 22 0.99% SMT1/SMT2/SMT3 21 0.95% SLS 19 0.86% CYP90D1 19 0.86% TRI/TRII 18 0.81% G8O/G8H 18 0.81% CYP80B1 17 0.77% CSE 17 0.77% CYP71 16 0.72% 16OMT 15 0.68% T16H 15 0.68% LAMT 15 0.68% 7DLH 14 0.63% NCS 14 0.63% HCT 12 0.54% RAS 11 0.5% DWF5 11 0.5% FNS 10 0.45% LAC 10 0.45% SGD 9 0.41% 8HGO 9 0.41% BBE 8 0.36% F5H/CYP84A 8 0.36% ROT3/CYP90C1 8 0.36% TPS 8 0.36% MPO 7 0.32% COR 7 0.32% ANR 7 0.32% CPD/CYP90A1 7 0.32% AACT 7 0.32% PMT 6 0.27% CNMT 6 0.27% TDC 6 0.27% CCR 6 0.27% TAT 6 0.27% SQS/FDFT1 6 0.27% GGPPS 6 0.27% TYDC_DDC 5 0.23% GES 4 0.18% CHI 4 0.18% DFR 4 0.18% CPR 4 0.18% BR6OX1/CYP85A1 4 0.18% SQE 4 0.18% DET2 4 0.18% CYP719 3 0.14% ADC 3 0.14% ANS/LDOX 3 0.14% FLS 3 0.14% CYP51G1 3 0.14% HYD1 3 0.14% HDR/IspH 3 0.14% MVD 3 0.14% MVK 3 0.14% MCT/IspD 3 0.14% HDS/IspG 3 0.14% FPPS 3 0.14% HMGS 3 0.14% ISY 2 0.09% CCoAOMT 2 0.09% HPPR 2 0.09% SMO1/SMO2 2 0.09% DXR 2 0.09% CMK/IspE 2 0.09% XMT_MXMT_DXMT 1 0.05% CYP80F1 1 0.05% ODC 1 0.05% 6OMT_4OMT_SOMT 1 0.05% DWF7 1 0.05% FK 1 0.05% DWF1 1 0.05% CPI1 1 0.05% PMK 1 0.05% HMGR 1 0.05% IDI 1 0.05% DXS 1 0.05%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Phenylpropanoid pathway 216 11 POD (102) View species results
Terpenoid pathway 202 19 CYP76 (70) View species results
Alkaloid pathway 164 21 NMT (34) View species results
Flavonoid pathway 108 9 CHS (29) View species results
Rosmarinic acid pathway 105 7 C4H (51) View species results
Steroid pathway 53 12 CAS (25) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 987 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 117 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Kpra2356170129310 Alkaloid TYDC_DDC medium borderline
Kpra2382200147940 Alkaloid TYDC_DDC medium borderline
Kpra2579990281620 Alkaloid TYDC_DDC low borderline
Kpra1626480006940 Alkaloid XMT_MXMT_DXMT medium borderline