Lagerstroemia indica (lagerstroemia_indica)

This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.

Pathway Coverage

6 Pathways

Terpenoid pathway 27.82% Alkaloid pathway 21.57% Phenylpropanoid pathway 19.95% Flavonoid pathway 13.5% Rosmarinic acid pathway 11.02% Steroid pathway 6.14%

Family Distribution

1970 Candidate Genes

C4H 6.57% C3'H/CYP98A 6.42% BAHD 5.17% CYP76 4.47% T3O 4.22% IFS 4.22% UGT 3.95% 7DLGT 3.72%

Other Families 61.27%

More Families (96)

UFGT 179 3.72% POD 158 3.28% 4CL 153 3.18% DWF4/CYP90B1 124 2.58% F3H 115 2.39% BR6OX2/CYP85A2 97 2.02% F3'H/CYP75B 93 1.93% NMT 83 1.72% STR 82 1.7% CODM/T6ODM 77 1.6% CAD 70 1.45% LAC 66 1.37% HCT 65 1.35% SMT1/SMT2/SMT3 62 1.29% TRI/TRII 61 1.27% CAS 58 1.21% CSE 56 1.16% CYP71 55 1.14% H6H 52 1.08% COMT 51 1.06% PYKS 50 1.04% IFR 45 0.93% GES 43 0.89% GS 43 0.89% TPS 43 0.89% PMT 42 0.87% IO 41 0.85% 16OMT 36 0.75% RAS 36 0.75% TAT 36 0.75% G8O/G8H 33 0.69% SGD 32 0.66% CPD/CYP90A1 31 0.64% LAMT 30 0.62% CYP90D1 29 0.6% PAL 27 0.56% CHS 26 0.54% T16H 25 0.52% F3'5'H/CYP75A 25 0.52% BBE 24 0.5% ANR 24 0.5% CCR 24 0.5% BR6OX1/CYP85A1 24 0.5% 7DLH 23 0.48% F5H/CYP84A 23 0.48% FNS 22 0.46% COR 21 0.44% 8HGO 17 0.35% SLS 17 0.35% ANS/LDOX 17 0.35% CNMT 16 0.33% SQE 15 0.31% CYP51G1 15 0.31% NCS 14 0.29% DFR 14 0.29% MPO 13 0.27% ROT3/CYP90C1 13 0.27% HPPR 12 0.25% SMO1/SMO2 11 0.23% FPPS 10 0.21% CPR 9 0.19% SQS/FDFT1 9 0.19% CCoAOMT 8 0.17% AACT 8 0.17% GGPPS 8 0.17% CYP719 7 0.15% MVK 7 0.15% TDC 6 0.12% TYDC_DDC 6 0.12% DET2 6 0.12% IDI 6 0.12% HMGR 6 0.12% ISY 5 0.1% MVD 5 0.1% DXS 5 0.1% 6OMT_4OMT_SOMT 4 0.08% CHI 4 0.08% HMGS 4 0.08% PMK 4 0.08% HDR/IspH 4 0.08% ADC 3 0.06% FLS 3 0.06% DWF7 3 0.06% HYD1 3 0.06% MCT/IspD 3 0.06% CYP80B1 2 0.04% DWF1 2 0.04% DXR 2 0.04% XMT_MXMT_DXMT 1 0.02% CPI1 1 0.02% DWF5 1 0.02% FK 1 0.02% GPPS 1 0.02% HDS/IspG 1 0.02% CMK/IspE 1 0.02% MDS/IspF 1 0.02%

Species Pathway Results

The links below show identification results for this species within each pathway, instead of opening the global pathway overview.

Pathway	Candidate Genes	Families	Top family	Results
Terpenoid pathway	548	19	BAHD (196)	View species results
Alkaloid pathway	425	20	7DLGT (94)	View species results
Phenylpropanoid pathway	393	11	POD (149)	View species results
Flavonoid pathway	266	9	UFGT (172)	View species results
Rosmarinic acid pathway	217	7	C4H (111)	View species results
Steroid pathway	121	12	CAS (43)	View species results

Broad Catalytic Groups

P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.

Catalytic group	Families	Candidate genes	Included families
P450/oxygenase	23	1923	7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase	3	350	BAHD, HCT, RAS

Identification Result List

Search the public identification results for this species; click pathway or family legends above to narrow within this species.

Current family filter: COR

Gene	Pathway	Family	Confidence	Status	Best Target
lagerstroemia_indica_GWHPCAXI002862	Alkaloid	COR	medium	pass	COR__00005__sp_Q9SQ70_COR11_PAPSO
lagerstroemia_indica_GWHPCAXI002863	Alkaloid	COR	medium	pass	COR__00005__sp_Q9SQ70_COR11_PAPSO
lagerstroemia_indica_GWHPCAXI004983	Alkaloid	COR	medium	pass	COR__00002__sp_Q9SQ67_COR14_PAPSO
lagerstroemia_indica_GWHPCAXI007571	Alkaloid	COR	medium	pass	COR__00002__sp_Q9SQ67_COR14_PAPSO
lagerstroemia_indica_GWHPCAXI008722	Alkaloid	COR	medium	pass	COR__00002__sp_Q9SQ67_COR14_PAPSO
lagerstroemia_indica_GWHPCAXI010745	Alkaloid	COR	medium	pass	COR__00003__sp_Q9SQ68_COR13_PAPSO
lagerstroemia_indica_GWHPCAXI011013	Alkaloid	COR	low	borderline	COR__00003__sp_Q9SQ68_COR13_PAPSO
lagerstroemia_indica_GWHPCAXI012450	Alkaloid	COR	medium	pass	COR__00002__sp_Q9SQ67_COR14_PAPSO
lagerstroemia_indica_GWHPCAXI013618	Alkaloid	COR	medium	pass	COR__00002__sp_Q9SQ67_COR14_PAPSO
lagerstroemia_indica_GWHPCAXI013619	Alkaloid	COR	low	borderline	COR__00003__sp_Q9SQ68_COR13_PAPSO
lagerstroemia_indica_GWHPCAXI014653	Alkaloid	COR	medium	pass	COR__00004__sp_Q9SQ69_COR12_PAPSO
lagerstroemia_indica_GWHPCAXI014745	Alkaloid	COR	medium	pass	COR__00002__sp_Q9SQ67_COR14_PAPSO
lagerstroemia_indica_GWHPCAXI014746	Alkaloid	COR	medium	pass	COR__00002__sp_Q9SQ67_COR14_PAPSO
lagerstroemia_indica_GWHPCAXI014747	Alkaloid	COR	medium	pass	COR__00002__sp_Q9SQ67_COR14_PAPSO
lagerstroemia_indica_GWHPCAXI015345	Alkaloid	COR	medium	pass	COR__00002__sp_Q9SQ67_COR14_PAPSO
lagerstroemia_indica_GWHPCAXI016926	Alkaloid	COR	medium	pass	COR__00002__sp_Q9SQ67_COR14_PAPSO
lagerstroemia_indica_GWHPCAXI019222	Alkaloid	COR	medium	pass	COR__00002__sp_Q9SQ67_COR14_PAPSO
lagerstroemia_indica_GWHPCAXI021566	Alkaloid	COR	medium	pass	COR__00002__sp_Q9SQ67_COR14_PAPSO
lagerstroemia_indica_GWHPCAXI023639	Alkaloid	COR	medium	pass	COR__00001__sp_B9VRJ2_COR15_PAPSO
lagerstroemia_indica_GWHPCAXI028455	Alkaloid	COR	medium	pass	COR__00002__sp_Q9SQ67_COR14_PAPSO
lagerstroemia_indica_GWHPCAXI031360	Alkaloid	COR	medium	pass	COR__00005__sp_Q9SQ70_COR11_PAPSO