Lagerstroemia indica (lagerstroemia_indica)
Imported from atlas release summary for Lagerstroemia indica.
1970
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
1970
Candidate Genes
C4H
6.57%
C3'H/CYP98A
6.42%
BAHD
5.17%
CYP76
4.47%
T3O
4.22%
IFS
4.22%
UGT
3.95%
7DLGT
3.72%
Other Families
61.27%
More Families (96)
UFGT
179
3.72%
POD
158
3.28%
4CL
153
3.18%
DWF4/CYP90B1
124
2.58%
F3H
115
2.39%
BR6OX2/CYP85A2
97
2.02%
F3'H/CYP75B
93
1.93%
NMT
83
1.72%
STR
82
1.7%
CODM/T6ODM
77
1.6%
CAD
70
1.45%
LAC
66
1.37%
HCT
65
1.35%
SMT1/SMT2/SMT3
62
1.29%
TRI/TRII
61
1.27%
CAS
58
1.21%
CSE
56
1.16%
CYP71
55
1.14%
H6H
52
1.08%
COMT
51
1.06%
PYKS
50
1.04%
IFR
45
0.93%
GES
43
0.89%
GS
43
0.89%
TPS
43
0.89%
PMT
42
0.87%
IO
41
0.85%
16OMT
36
0.75%
RAS
36
0.75%
TAT
36
0.75%
G8O/G8H
33
0.69%
SGD
32
0.66%
CPD/CYP90A1
31
0.64%
LAMT
30
0.62%
CYP90D1
29
0.6%
PAL
27
0.56%
CHS
26
0.54%
T16H
25
0.52%
F3'5'H/CYP75A
25
0.52%
BBE
24
0.5%
ANR
24
0.5%
CCR
24
0.5%
BR6OX1/CYP85A1
24
0.5%
7DLH
23
0.48%
F5H/CYP84A
23
0.48%
FNS
22
0.46%
COR
21
0.44%
8HGO
17
0.35%
SLS
17
0.35%
ANS/LDOX
17
0.35%
CNMT
16
0.33%
SQE
15
0.31%
CYP51G1
15
0.31%
NCS
14
0.29%
DFR
14
0.29%
MPO
13
0.27%
ROT3/CYP90C1
13
0.27%
HPPR
12
0.25%
SMO1/SMO2
11
0.23%
FPPS
10
0.21%
CPR
9
0.19%
SQS/FDFT1
9
0.19%
CCoAOMT
8
0.17%
AACT
8
0.17%
GGPPS
8
0.17%
CYP719
7
0.15%
MVK
7
0.15%
TDC
6
0.12%
TYDC_DDC
6
0.12%
DET2
6
0.12%
IDI
6
0.12%
HMGR
6
0.12%
ISY
5
0.1%
MVD
5
0.1%
DXS
5
0.1%
6OMT_4OMT_SOMT
4
0.08%
CHI
4
0.08%
HMGS
4
0.08%
PMK
4
0.08%
HDR/IspH
4
0.08%
ADC
3
0.06%
FLS
3
0.06%
DWF7
3
0.06%
HYD1
3
0.06%
MCT/IspD
3
0.06%
CYP80B1
2
0.04%
DWF1
2
0.04%
DXR
2
0.04%
XMT_MXMT_DXMT
1
0.02%
CPI1
1
0.02%
DWF5
1
0.02%
FK
1
0.02%
GPPS
1
0.02%
HDS/IspG
1
0.02%
CMK/IspE
1
0.02%
MDS/IspF
1
0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 548 | 19 | BAHD (196) | View species results |
| Alkaloid pathway | 425 | 20 | 7DLGT (94) | View species results |
| Phenylpropanoid pathway | 393 | 11 | POD (149) | View species results |
| Flavonoid pathway | 266 | 9 | UFGT (172) | View species results |
| Rosmarinic acid pathway | 217 | 7 | C4H (111) | View species results |
| Steroid pathway | 121 | 12 | CAS (43) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 23 | 1923 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 350 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: STR
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| lagerstroemia_indica_GWHPCAXI019210 | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| lagerstroemia_indica_GWHPCAXI019255 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| lagerstroemia_indica_GWHPCAXI019462 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| lagerstroemia_indica_GWHPCAXI019551 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| lagerstroemia_indica_GWHPCAXI019578 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| lagerstroemia_indica_GWHPCAXI019893 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| lagerstroemia_indica_GWHPCAXI020183 | Alkaloid | STR | low | borderline | STR__00002__sp_P68175_STSY_RAUSE |
| lagerstroemia_indica_GWHPCAXI020643 | Alkaloid | STR | low | borderline | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| lagerstroemia_indica_GWHPCAXI020793 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| lagerstroemia_indica_GWHPCAXI021622 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| lagerstroemia_indica_GWHPCAXI022386 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| lagerstroemia_indica_GWHPCAXI022388 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| lagerstroemia_indica_GWHPCAXI022389 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| lagerstroemia_indica_GWHPCAXI022390 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| lagerstroemia_indica_GWHPCAXI022542 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| lagerstroemia_indica_GWHPCAXI022591 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| lagerstroemia_indica_GWHPCAXI022877 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| lagerstroemia_indica_GWHPCAXI024084 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| lagerstroemia_indica_GWHPCAXI024977 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| lagerstroemia_indica_GWHPCAXI026618 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| lagerstroemia_indica_GWHPCAXI027176 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| lagerstroemia_indica_GWHPCAXI028813 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| lagerstroemia_indica_GWHPCAXI028814 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| lagerstroemia_indica_GWHPCAXI029049 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| lagerstroemia_indica_GWHPCAXI030376 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| lagerstroemia_indica_GWHPCAXI030522 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| lagerstroemia_indica_GWHPCAXI030523 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| lagerstroemia_indica_GWHPCAXI030524 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| lagerstroemia_indica_GWHPCAXI031200 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| lagerstroemia_indica_GWHPCAXI031486 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| lagerstroemia_indica_GWHPCAXI032236 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| lagerstroemia_indica_GWHPCAXI032538 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |