PlantSME Plant secondary metabolism enzyme database

Lepidozia reptans (lepidozia_reptans)

Imported from atlas release summary for Lepidozia reptans.

633
Candidate Genes
102
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (94)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 146 19 BAHD (62) View species results
Phenylpropanoid pathway 145 11 POD (60) View species results
Alkaloid pathway 127 17 NMT (21) View species results
Flavonoid pathway 98 10 UFGT (37) View species results
Rosmarinic acid pathway 79 7 C4H (36) View species results
Steroid pathway 38 14 CAS (10) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 662 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 154 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Gene Pathway Family Confidence Status
Lrep1678300148340 Alkaloid NMT medium pass
Lrep1678670151630 Alkaloid NMT medium pass
Lrep1679500158500 Alkaloid NMT medium pass
Lrep1679540159060 Alkaloid NMT low borderline
Lrep1680810172970 Alkaloid NMT medium borderline
Lrep1680900174680 Alkaloid NMT low borderline
Lrep1680900174980 Alkaloid NMT medium pass
Lrep1681210176630 Alkaloid NMT medium pass
Lrep1681210176930 Alkaloid NMT medium borderline
Lrep1681300178520 Alkaloid NMT medium pass
Lrep835560190430 Alkaloid NMT medium pass
Lrep837630190620 Alkaloid NMT low borderline
Lrep933260194890 Alkaloid NMT medium pass
Lrep935270195070 Alkaloid NMT low borderline
Lrep1101930007290 Alkaloid PMT low borderline
Lrep1103660008170 Alkaloid PMT medium borderline
Lrep1638510052350 Alkaloid PMT low borderline
Lrep1660380079460 Alkaloid PMT low borderline
Lrep1663400083720 Alkaloid PMT low borderline
Lrep934040194980 Alkaloid PMT medium pass
Lrep1490130019100 Alkaloid PYKS low borderline
Lrep1595980031970 Alkaloid PYKS high pass
Lrep1621430040150 Alkaloid PYKS high pass
Lrep1639640053870 Alkaloid PYKS medium pass
Lrep1651400065090 Alkaloid PYKS low borderline
Lrep1664200086240 Alkaloid PYKS high pass
Lrep1666600092620 Alkaloid PYKS low borderline
Lrep1666600092630 Alkaloid PYKS low borderline
Lrep1673770115260 Alkaloid PYKS low borderline
Lrep1675890129460 Alkaloid PYKS high pass
Lrep1677460140380 Alkaloid PYKS high pass
Lrep1677630141810 Alkaloid PYKS low borderline
Lrep1100680005580 Alkaloid SGD medium pass
Lrep1331810012890 Alkaloid SGD low borderline
Lrep1460410015730 Alkaloid SGD medium pass
Lrep1460410015740 Alkaloid SGD medium pass
Lrep1460410015760 Alkaloid SGD medium pass
Lrep1546050025020 Alkaloid SGD low borderline
Lrep1556050027820 Alkaloid SGD medium pass
Lrep1576060028130 Alkaloid SGD medium pass
Lrep1632440047230 Alkaloid SGD medium pass
Lrep1637300049950 Alkaloid SGD low borderline
Lrep1678160146370 Alkaloid SGD low borderline
Lrep1678870152150 Alkaloid SGD low borderline
Lrep1679880163060 Alkaloid SGD low borderline
Lrep1681580180910 Alkaloid SGD medium pass
Lrep1537150021970 Alkaloid SLS medium borderline
Lrep1603020035390 Alkaloid SLS medium borderline
Lrep1647320060400 Alkaloid SLS medium borderline
Lrep1663380083580 Alkaloid SLS medium borderline