Leptochloa chinensis (leptochloa_chinensis)
Imported from atlas release summary for Leptochloa chinensis.
2670
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
2670
Candidate Genes
C4H
6.6%
BAHD
5.97%
C3'H/CYP98A
5.85%
POD
4.58%
UGT
4.53%
7DLGT
4.17%
4CL
3.9%
CYP76
3.67%
Other Families
60.73%
More Families (98)
IFS
238
3.36%
T3O
223
3.15%
DWF4/CYP90B1
193
2.73%
UFGT
180
2.54%
F3'H/CYP75B
177
2.5%
NMT
152
2.15%
F3H
148
2.09%
BR6OX2/CYP85A2
141
1.99%
STR
125
1.77%
CYP71
120
1.69%
SMT1/SMT2/SMT3
97
1.37%
LAC
92
1.3%
T16H
86
1.21%
IFR
83
1.17%
CODM/T6ODM
82
1.16%
RAS
81
1.14%
CAD
80
1.13%
H6H
78
1.1%
G8O/G8H
78
1.1%
HCT
75
1.06%
CCR
73
1.03%
TRI/TRII
68
0.96%
SLS
67
0.95%
PMT
66
0.93%
FNS
64
0.9%
ANR
58
0.82%
SGD
57
0.81%
GS
56
0.79%
CYP90D1
56
0.79%
CAS
53
0.75%
PAL
48
0.68%
PYKS
47
0.66%
F5H/CYP84A
46
0.65%
COMT
46
0.65%
NCS
45
0.64%
CSE
44
0.62%
TPS
44
0.62%
DFR
42
0.59%
COR
40
0.56%
16OMT
39
0.55%
GES
38
0.54%
IO
37
0.52%
F3'5'H/CYP75A
32
0.45%
BBE
29
0.41%
8HGO
29
0.41%
CHS
29
0.41%
CYP51G1
29
0.41%
CPD/CYP90A1
27
0.38%
7DLH
26
0.37%
TAT
26
0.37%
FPPS
25
0.35%
CYP80B1
21
0.3%
CNMT
21
0.3%
TDC
20
0.28%
BR6OX1/CYP85A1
19
0.27%
TYDC_DDC
16
0.23%
ANS/LDOX
16
0.23%
LAMT
15
0.21%
GGPPS
15
0.21%
CCoAOMT
14
0.2%
CYP719
13
0.18%
CPR
13
0.18%
SQS/FDFT1
12
0.17%
CHI
11
0.16%
HPPR
11
0.16%
SMO1/SMO2
10
0.14%
DET2
10
0.14%
AACT
9
0.13%
MVK
9
0.13%
MPO
8
0.11%
ROT3/CYP90C1
8
0.11%
MVD
8
0.11%
XMT_MXMT_DXMT
7
0.1%
ISY
7
0.1%
6OMT_4OMT_SOMT
7
0.1%
DWF1
7
0.1%
DXS
7
0.1%
HMGR
6
0.08%
MDS/IspF
5
0.07%
MCT/IspD
5
0.07%
HDS/IspG
5
0.07%
FLS
4
0.06%
FK
4
0.06%
HYD1
4
0.06%
HMGS
4
0.06%
IDI
4
0.06%
ADC
3
0.04%
ODC
3
0.04%
CYP80F1
3
0.04%
DWF5
3
0.04%
SQE
3
0.04%
GPPS
3
0.04%
DXR
3
0.04%
CPI1
2
0.03%
CMK/IspE
2
0.03%
PMK
2
0.03%
HDR/IspH
2
0.03%
DWF7
1
0.01%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 779 | 19 | BAHD (290) | View species results |
| Phenylpropanoid pathway | 638 | 12 | POD (302) | View species results |
| Alkaloid pathway | 556 | 21 | 7DLGT (93) | View species results |
| Flavonoid pathway | 295 | 13 | UFGT (135) | View species results |
| Rosmarinic acid pathway | 261 | 7 | C4H (105) | View species results |
| Steroid pathway | 141 | 12 | SMT1/SMT2/SMT3 (56) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 2781 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 579 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: TRI/TRII
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| leptochloa_chinensis_GWHPBJVB045690 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00003__sp_H9BFQ1_TPRL2_ERYCB |
| leptochloa_chinensis_GWHPBJVB045823 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00003__sp_H9BFQ1_TPRL2_ERYCB |
| leptochloa_chinensis_GWHPBJVB047155 | Alkaloid | TRI/TRII | low | borderline | TRI_TRII__00002__sp_H9BFQ0_TPRL1_ERYCB |
| leptochloa_chinensis_GWHPBJVB047158 | Alkaloid | TRI/TRII | low | borderline | TRI_TRII__00002__sp_H9BFQ0_TPRL1_ERYCB |
| leptochloa_chinensis_GWHPBJVB047159 | Alkaloid | TRI/TRII | low | borderline | TRI_TRII__00002__sp_H9BFQ0_TPRL1_ERYCB |
| leptochloa_chinensis_GWHPBJVB047160 | Alkaloid | TRI/TRII | low | borderline | TRI_TRII__00002__sp_H9BFQ0_TPRL1_ERYCB |
| leptochloa_chinensis_GWHPBJVB048004 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00003__sp_H9BFQ1_TPRL2_ERYCB |
| leptochloa_chinensis_GWHPBJVB048005 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00003__sp_H9BFQ1_TPRL2_ERYCB |
| leptochloa_chinensis_GWHPBJVB048145 | Alkaloid | TRI/TRII | low | borderline | TRI_TRII__00002__sp_H9BFQ0_TPRL1_ERYCB |
| leptochloa_chinensis_GWHPBJVB049665 | Alkaloid | TRI/TRII | low | borderline | TRI_TRII__00002__sp_H9BFQ0_TPRL1_ERYCB |
| leptochloa_chinensis_GWHPBJVB049666 | Alkaloid | TRI/TRII | low | borderline | TRI_TRII__00002__sp_H9BFQ0_TPRL1_ERYCB |
| leptochloa_chinensis_GWHPBJVB049669 | Alkaloid | TRI/TRII | low | borderline | TRI_TRII__00002__sp_H9BFQ0_TPRL1_ERYCB |
| leptochloa_chinensis_GWHPBJVB050509 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00003__sp_H9BFQ1_TPRL2_ERYCB |
| leptochloa_chinensis_GWHPBJVB050657 | Alkaloid | TRI/TRII | low | borderline | TRI_TRII__00002__sp_H9BFQ0_TPRL1_ERYCB |
| leptochloa_chinensis_GWHPBJVB052790 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00006__sp_Q9ZW03_TRNH3_ARATH |
| leptochloa_chinensis_GWHPBJVB053245 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00004__sp_H9BFQ2_TPRL3_ERYCB |
| leptochloa_chinensis_GWHPBJVB053246 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00004__sp_H9BFQ2_TPRL3_ERYCB |
| leptochloa_chinensis_GWHPBJVB055279 | Alkaloid | TRI/TRII | low | borderline | TRI_TRII__00003__sp_H9BFQ1_TPRL2_ERYCB |