PlantSME Plant secondary metabolism enzyme database

Leptodermis oblonga (leptodermis_oblonga)

Imported from atlas release summary for Leptodermis oblonga.

1809
Candidate Genes
101
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Algae
Site group 29
Bryophytes
Site group 125
Lycophytes/Ferns
Site group 4
Gymnosperms
Site group 6
Basal angiosperms
Site group 13
Monocots
Site group 117
Eudicots
Current group 495
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
Terpenoid pathway 31.51% Alkaloid pathway 21.78% Phenylpropanoid pathway 18.19% Flavonoid pathway 15.48% Rosmarinic acid pathway 8.02% Steroid pathway 5.03%
Family Distribution
C3'H/CYP98A 6.57% C4H 6.16% UGT 5.26% 7DLGT 5.04% UFGT 4.96% BAHD 4.7% IFS 3.95% T3O 3.91%
Other Families 59.45%
More Families (93)
CYP76 161 3.46% F3H 156 3.35% POD 142 3.05% 4CL 114 2.45% F3'H/CYP75B 112 2.4% DWF4/CYP90B1 106 2.28% STR 85 1.82% BR6OX2/CYP85A2 85 1.82% CODM/T6ODM 79 1.7% CAD 73 1.57% H6H 69 1.48% TPS 68 1.46% CYP71 67 1.44% NMT 63 1.35% GES 63 1.35% CAS 62 1.33% SGD 53 1.14% SMT1/SMT2/SMT3 53 1.14% CYP90D1 51 1.09% TRI/TRII 50 1.07% SLS 48 1.03% LAC 44 0.94% CSE 40 0.86% IFR 37 0.79% HCT 37 0.79% BBE 36 0.77% COMT 36 0.77% TAT 36 0.77% CPD/CYP90A1 36 0.77% GS 35 0.75% 7DLH 34 0.73% NCS 30 0.64% IO 29 0.62% 16OMT 28 0.6% BR6OX1/CYP85A1 28 0.6% LAMT 27 0.58% PYKS 27 0.58% RAS 27 0.58% T16H 24 0.52% G8O/G8H 23 0.49% CYP51G1 23 0.49% FNS 22 0.47% CCR 22 0.47% ANR 20 0.43% F3'5'H/CYP75A 19 0.41% F5H/CYP84A 19 0.41% PMT 17 0.36% COR 15 0.32% 8HGO 15 0.32% FPPS 13 0.28% CYP719 12 0.26% CNMT 12 0.26% ROT3/CYP90C1 11 0.24% DFR 10 0.21% MPO 9 0.19% PAL 9 0.19% GGPPS 9 0.19% SQE 8 0.17% ISY 7 0.15% XMT_MXMT_DXMT 7 0.15% CHS 7 0.15% CCoAOMT 7 0.15% HPPR 7 0.15% DET2 7 0.15% AACT 7 0.15% ANS/LDOX 6 0.13% CPR 6 0.13% DXS 6 0.13% TYDC_DDC 5 0.11% MVK 5 0.11% MVD 5 0.11% HDS/IspG 5 0.11% SMO1/SMO2 4 0.09% SQS/FDFT1 4 0.09% CMK/IspE 4 0.09% CYP80B1 3 0.06% CHI 3 0.06% HYD1 3 0.06% PMK 3 0.06% TDC 2 0.04% ADC 2 0.04% 6OMT_4OMT_SOMT 2 0.04% CPI1 2 0.04% MCT/IspD 2 0.04% HMGR 2 0.04% FK 1 0.02% DWF7 1 0.02% DWF1 1 0.02% DWF5 1 0.02% HDR/IspH 1 0.02% DXR 1 0.02% IDI 1 0.02% HMGS 1 0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 570 18 UGT (232) View species results
Alkaloid pathway 394 21 7DLGT (75) View species results
Phenylpropanoid pathway 329 13 POD (135) View species results
Flavonoid pathway 280 8 UFGT (217) View species results
Rosmarinic acid pathway 145 7 C4H (72) View species results
Steroid pathway 91 11 CAS (42) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 1850 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 283 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: PAL
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Gene Pathway Family Confidence Status Best Target
leptodermis_oblonga_EVM0013483.1 Flavonoid PAL high pass PAL__00005__sp_Q50EX7_PAL1_PETHY
leptodermis_oblonga_EVM0026867.1 Flavonoid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
leptodermis_oblonga_EVM0027295.1 Flavonoid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
leptodermis_oblonga_EVM0013483.1 Phenylpropanoid PAL high pass PAL__00005__sp_Q50EX7_PAL1_PETHY
leptodermis_oblonga_EVM0026867.1 Phenylpropanoid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
leptodermis_oblonga_EVM0027295.1 Phenylpropanoid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
leptodermis_oblonga_EVM0013483.1 Rosmarinic Acid PAL high pass PAL__00005__sp_Q50EX7_PAL1_PETHY
leptodermis_oblonga_EVM0026867.1 Rosmarinic Acid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
leptodermis_oblonga_EVM0027295.1 Rosmarinic Acid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR