Lolium perenne (lolium_perenne)
Imported from atlas release summary for Lolium perenne.
1630
Candidate Genes
101
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
1630
Candidate Genes
BAHD
6.68%
POD
6.35%
C3'H/CYP98A
5.48%
C4H
5.2%
4CL
4.84%
NMT
3.31%
T3O
3.17%
IFS
3.17%
Other Families
61.79%
More Families (93)
STR
113
3.15%
SMT1/SMT2/SMT3
87
2.42%
CYP76
86
2.39%
SGD
83
2.31%
DWF4/CYP90B1
81
2.25%
CAD
79
2.2%
F3'H/CYP75B
77
2.14%
F3H
77
2.14%
CAS
76
2.12%
CYP71
64
1.78%
TPS
62
1.73%
UGT
61
1.7%
7DLGT
56
1.56%
SLS
56
1.56%
BR6OX2/CYP85A2
55
1.53%
UFGT
54
1.5%
ANR
51
1.42%
CODM/T6ODM
49
1.36%
GES
48
1.34%
LAC
48
1.34%
IFR
37
1.03%
CSE
36
1.0%
CCR
34
0.95%
H6H
33
0.92%
TRI/TRII
31
0.86%
COMT
31
0.86%
CYP90D1
31
0.86%
CYP51G1
29
0.81%
COR
27
0.75%
16OMT
27
0.75%
T16H
26
0.72%
GS
25
0.7%
8HGO
24
0.67%
PAL
24
0.67%
PYKS
23
0.64%
PMT
21
0.58%
RAS
21
0.58%
HCT
19
0.53%
CNMT
18
0.5%
FNS
18
0.5%
7DLH
17
0.47%
DFR
17
0.47%
CHS
17
0.47%
LAMT
16
0.45%
TAT
14
0.39%
SQS/FDFT1
14
0.39%
BR6OX1/CYP85A1
14
0.39%
CPD/CYP90A1
14
0.39%
NCS
13
0.36%
CPR
13
0.36%
AACT
13
0.36%
MPO
12
0.33%
CCoAOMT
11
0.31%
F5H/CYP84A
11
0.31%
F3'5'H/CYP75A
10
0.28%
IO
9
0.25%
G8O/G8H
9
0.25%
FPPS
7
0.19%
GGPPS
7
0.19%
6OMT_4OMT_SOMT
5
0.14%
XMT_MXMT_DXMT
5
0.14%
ANS/LDOX
5
0.14%
HPPR
5
0.14%
SMO1/SMO2
5
0.14%
IDI
5
0.14%
HMGR
4
0.11%
DXR
4
0.11%
DWF1
3
0.08%
ROT3/CYP90C1
3
0.08%
HMGS
3
0.08%
MCT/IspD
3
0.08%
TDC
2
0.06%
CYP80B1
2
0.06%
CHI
2
0.06%
DWF7
2
0.06%
HYD1
2
0.06%
CPI1
2
0.06%
DET2
2
0.06%
CMK/IspE
2
0.06%
MVK
2
0.06%
MVD
2
0.06%
DXS
2
0.06%
PMK
2
0.06%
CYP719
1
0.03%
CYP80F1
1
0.03%
TYDC_DDC
1
0.03%
ISY
1
0.03%
DWF5
1
0.03%
FK
1
0.03%
SQE
1
0.03%
MDS/IspF
1
0.03%
HDR/IspH
1
0.03%
HDS/IspG
1
0.03%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Phenylpropanoid pathway | 416 | 11 | POD (220) | View species results |
| Alkaloid pathway | 389 | 20 | SGD (74) | View species results |
| Terpenoid pathway | 389 | 20 | BAHD (205) | View species results |
| Steroid pathway | 163 | 12 | SMT1/SMT2/SMT3 (73) | View species results |
| Rosmarinic acid pathway | 139 | 7 | C4H (64) | View species results |
| Flavonoid pathway | 134 | 10 | UFGT (51) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 1208 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 280 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CCR
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| Lperescaffold_1030|ref00201170004430.1 | Phenylpropanoid | CCR | medium | pass | CCR__00005__sp_Q0JKZ0_SNL6_ORYSJ |
| Lperescaffold_1030|ref00201170004430.2 | Phenylpropanoid | CCR | medium | pass | CCR__00005__sp_Q0JKZ0_SNL6_ORYSJ |
| Lperescaffold_1030|ref00201170004440.1 | Phenylpropanoid | CCR | medium | pass | CCR__00005__sp_Q0JKZ0_SNL6_ORYSJ |
| Lperescaffold_10589|ref00304430008600.1 | Phenylpropanoid | CCR | medium | borderline | CCR__00004__sp_G7JEE5_CCR2_MEDTR |
| Lperescaffold_13803|ref00393800047510.1 | Phenylpropanoid | CCR | medium | borderline | CCR__00001__sp_A0A059TC02_CCR1_PETHY |
| Lperescaffold_1535|ref00363550064520.1 | Phenylpropanoid | CCR | medium | borderline | CCR__00006__sp_Q6K9A2_CCR1_ORYSJ |
| Lperescaffold_1535|ref00363550064520.2 | Phenylpropanoid | CCR | medium | borderline | CCR__00006__sp_Q6K9A2_CCR1_ORYSJ |
| Lperescaffold_1535|ref00363550064520.3 | Phenylpropanoid | CCR | low | borderline | CCR__00006__sp_Q6K9A2_CCR1_ORYSJ |
| Lperescaffold_21494|ref00087620104550.1 | Phenylpropanoid | CCR | medium | borderline | CCR__00006__sp_Q6K9A2_CCR1_ORYSJ |
| Lperescaffold_2324|ref00361970112490.1 | Phenylpropanoid | CCR | low | borderline | CCR__00006__sp_Q6K9A2_CCR1_ORYSJ |
| Lperescaffold_2657|ref00357210125520.1 | Phenylpropanoid | CCR | medium | borderline | CCR__00001__sp_A0A059TC02_CCR1_PETHY |
| Lperescaffold_2657|ref00357210125520.2 | Phenylpropanoid | CCR | medium | borderline | CCR__00001__sp_A0A059TC02_CCR1_PETHY |
| Lperescaffold_2657|ref00357210125520.3 | Phenylpropanoid | CCR | medium | borderline | CCR__00001__sp_A0A059TC02_CCR1_PETHY |
| Lperescaffold_2657|ref00357210125520.4 | Phenylpropanoid | CCR | medium | borderline | CCR__00001__sp_A0A059TC02_CCR1_PETHY |
| Lperescaffold_2657|ref00357210125520.5 | Phenylpropanoid | CCR | medium | pass | CCR__00006__sp_Q6K9A2_CCR1_ORYSJ |
| Lperescaffold_26669|ref00343620125840.1 | Phenylpropanoid | CCR | medium | borderline | CCR__00002__sp_A0A072VDF2_CCR1_MEDTR |
| Lperescaffold_26669|ref00343620125840.2 | Phenylpropanoid | CCR | medium | borderline | CCR__00001__sp_A0A059TC02_CCR1_PETHY |
| Lperescaffold_2785|ref00295680130670.1 | Phenylpropanoid | CCR | medium | borderline | CCR__00001__sp_A0A059TC02_CCR1_PETHY |
| Lperescaffold_2994|ref00216780137810.2 | Phenylpropanoid | CCR | medium | borderline | CCR__00001__sp_A0A059TC02_CCR1_PETHY |
| Lperescaffold_3190|ref00134000143850.1 | Phenylpropanoid | CCR | medium | borderline | CCR__00001__sp_A0A059TC02_CCR1_PETHY |
| Lperescaffold_3412|ref00170860150940.1 | Phenylpropanoid | CCR | medium | pass | CCR__00005__sp_Q0JKZ0_SNL6_ORYSJ |
| Lperescaffold_346|ref00458240152610.1 | Phenylpropanoid | CCR | medium | borderline | CCR__00002__sp_A0A072VDF2_CCR1_MEDTR |
| Lperescaffold_346|ref00458240152610.2 | Phenylpropanoid | CCR | medium | borderline | CCR__00001__sp_A0A059TC02_CCR1_PETHY |
| Lperescaffold_3786|ref00296020162430.1 | Phenylpropanoid | CCR | medium | borderline | CCR__00001__sp_A0A059TC02_CCR1_PETHY |
| Lperescaffold_435|ref00033310177240.1 | Phenylpropanoid | CCR | medium | borderline | CCR__00001__sp_A0A059TC02_CCR1_PETHY |
| Lperescaffold_5136|ref00319130197740.1 | Phenylpropanoid | CCR | medium | borderline | CCR__00001__sp_A0A059TC02_CCR1_PETHY |
| Lperescaffold_5136|ref00319130197750.1 | Phenylpropanoid | CCR | medium | borderline | CCR__00001__sp_A0A059TC02_CCR1_PETHY |
| Lperescaffold_6084|ref00271090217650.1 | Phenylpropanoid | CCR | medium | borderline | CCR__00001__sp_A0A059TC02_CCR1_PETHY |
| Lperescaffold_7238|ref00355820239330.1 | Phenylpropanoid | CCR | medium | borderline | CCR__00002__sp_A0A072VDF2_CCR1_MEDTR |
| Lperescaffold_7238|ref00355820239330.2 | Phenylpropanoid | CCR | medium | borderline | CCR__00002__sp_A0A072VDF2_CCR1_MEDTR |
| Lperescaffold_7445|ref00084820242940.1 | Phenylpropanoid | CCR | medium | borderline | CCR__00001__sp_A0A059TC02_CCR1_PETHY |
| Lperescaffold_7578|ref00288500245120.1 | Phenylpropanoid | CCR | medium | pass | CCR__00002__sp_A0A072VDF2_CCR1_MEDTR |
| Lperescaffold_8654|ref00445270262930.1 | Phenylpropanoid | CCR | medium | borderline | CCR__00001__sp_A0A059TC02_CCR1_PETHY |
| Lperescaffold_875|ref00295850264640.2 | Phenylpropanoid | CCR | medium | pass | CCR__00006__sp_Q6K9A2_CCR1_ORYSJ |