Luffa cylindrica (luffa_cylindrica)
/
Imported from atlas release summary for Luffa cylindrica.
1352
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
1352
Candidate Genes
C4H
6.77%
C3'H/CYP98A
6.34%
BAHD
5.45%
CYP76
4.59%
IFS
4.1%
UGT
3.93%
7DLGT
3.76%
UFGT
3.73%
Other Families
61.33%
More Families (96)
4CL
126
3.61%
T3O
121
3.47%
POD
114
3.27%
DWF4/CYP90B1
84
2.41%
F3H
81
2.32%
PAL
66
1.89%
F3'H/CYP75B
64
1.84%
BR6OX2/CYP85A2
64
1.84%
NMT
59
1.69%
STR
54
1.55%
CAD
53
1.52%
CAS
50
1.43%
TPS
48
1.38%
CODM/T6ODM
46
1.32%
SMT1/SMT2/SMT3
45
1.29%
GES
44
1.26%
H6H
42
1.2%
TRI/TRII
37
1.06%
BBE
37
1.06%
CSE
36
1.03%
IFR
35
1.0%
LAC
35
1.0%
IO
33
0.95%
SLS
30
0.86%
HCT
30
0.86%
CYP71
30
0.86%
SGD
27
0.77%
F3'5'H/CYP75A
26
0.75%
CYP90D1
26
0.75%
GS
25
0.72%
TAT
25
0.72%
G8O/G8H
24
0.69%
PYKS
24
0.69%
T16H
22
0.63%
COMT
22
0.63%
FNS
21
0.6%
BR6OX1/CYP85A1
21
0.6%
CYP51G1
21
0.6%
NCS
19
0.55%
CCR
19
0.55%
16OMT
18
0.52%
ANR
18
0.52%
CPD/CYP90A1
18
0.52%
PMT
16
0.46%
LAMT
16
0.46%
F5H/CYP84A
16
0.46%
RAS
16
0.46%
8HGO
11
0.32%
CNMT
10
0.29%
7DLH
10
0.29%
CYP80B1
10
0.29%
CYP719
10
0.29%
DFR
10
0.29%
GGPPS
10
0.29%
MPO
9
0.26%
CHS
9
0.26%
ROT3/CYP90C1
9
0.26%
DXS
9
0.26%
ANS/LDOX
8
0.23%
CPR
8
0.23%
AACT
8
0.23%
COR
7
0.2%
CCoAOMT
7
0.2%
SQE
7
0.2%
HPPR
6
0.17%
SQS/FDFT1
6
0.17%
FPPS
6
0.17%
TYDC_DDC
5
0.14%
DET2
5
0.14%
HMGR
5
0.14%
MVK
5
0.14%
CHI
4
0.11%
PMK
4
0.11%
ODC
3
0.09%
ISY
2
0.06%
XMT_MXMT_DXMT
2
0.06%
CYP80F1
2
0.06%
SMO1/SMO2
2
0.06%
DWF1
2
0.06%
CPI1
2
0.06%
FK
2
0.06%
HDR/IspH
2
0.06%
IDI
2
0.06%
MVD
2
0.06%
MCT/IspD
2
0.06%
ADC
1
0.03%
FLS
1
0.03%
DWF5
1
0.03%
HYD1
1
0.03%
DWF7
1
0.03%
GPPS
1
0.03%
HMGS
1
0.03%
CMK/IspE
1
0.03%
DXR
1
0.03%
HDS/IspG
1
0.03%
MDS/IspF
1
0.03%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 389 | 21 | BAHD (134) | View species results |
| Phenylpropanoid pathway | 280 | 11 | POD (105) | View species results |
| Alkaloid pathway | 256 | 20 | 7DLGT (50) | View species results |
| Flavonoid pathway | 205 | 9 | UFGT (117) | View species results |
| Rosmarinic acid pathway | 140 | 7 | C4H (64) | View species results |
| Steroid pathway | 82 | 11 | CAS (39) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 1401 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 236 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: PAL
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| luffa_cylindrica_Maker00009938 | Rosmarinic Acid | PAL | high | pass | PAL__00001__sp_P24481_PAL1_PETCR |
| luffa_cylindrica_Maker00012461 | Rosmarinic Acid | PAL | high | pass | PAL__00002__sp_P35510_PAL1_ARATH |
| luffa_cylindrica_Maker00012611 | Rosmarinic Acid | PAL | high | pass | PAL__00003__sp_P45724_PAL2_ARATH |
| luffa_cylindrica_Maker00012681 | Rosmarinic Acid | PAL | high | pass | PAL__00002__sp_P35510_PAL1_ARATH |
| luffa_cylindrica_Maker00013171 | Rosmarinic Acid | PAL | high | pass | PAL__00001__sp_P24481_PAL1_PETCR |
| luffa_cylindrica_Maker00013190 | Rosmarinic Acid | PAL | high | pass | PAL__00003__sp_P45724_PAL2_ARATH |
| luffa_cylindrica_Maker00013422 | Rosmarinic Acid | PAL | high | pass | PAL__00002__sp_P35510_PAL1_ARATH |
| luffa_cylindrica_Maker00013427 | Rosmarinic Acid | PAL | high | pass | PAL__00002__sp_P35510_PAL1_ARATH |
| luffa_cylindrica_Maker00013549 | Rosmarinic Acid | PAL | high | pass | PAL__00003__sp_P45724_PAL2_ARATH |
| luffa_cylindrica_Maker00021783 | Rosmarinic Acid | PAL | high | pass | PAL__00005__sp_Q50EX7_PAL1_PETHY |
| luffa_cylindrica_Maker00030704 | Rosmarinic Acid | PAL | medium | pass | PAL__00005__sp_Q50EX7_PAL1_PETHY |
| luffa_cylindrica_Maker00030705 | Rosmarinic Acid | PAL | high | pass | PAL__00002__sp_P35510_PAL1_ARATH |
| luffa_cylindrica_Maker00030731 | Rosmarinic Acid | PAL | high | pass | PAL__00001__sp_P24481_PAL1_PETCR |
| luffa_cylindrica_Maker00030733 | Rosmarinic Acid | PAL | high | pass | PAL__00003__sp_P45724_PAL2_ARATH |
| luffa_cylindrica_Maker00030758 | Rosmarinic Acid | PAL | high | pass | PAL__00003__sp_P45724_PAL2_ARATH |
| luffa_cylindrica_Maker00039849 | Rosmarinic Acid | PAL | high | pass | PAL__00001__sp_P24481_PAL1_PETCR |