PlantSME Plant secondary metabolism enzyme database

Malus baccata (malus_baccata)

Imported from atlas release summary for Malus baccata.

2200
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Algae
Site group 29
Bryophytes
Site group 125
Lycophytes/Ferns
Site group 4
Gymnosperms
Site group 6
Basal angiosperms
Site group 13
Monocots
Site group 117
Eudicots
Current group 495
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
Terpenoid pathway 29.23% Alkaloid pathway 22.5% Phenylpropanoid pathway 20.59% Flavonoid pathway 13.32% Rosmarinic acid pathway 8.82% Steroid pathway 5.55%
Family Distribution
C4H 5.95% BAHD 5.62% C3'H/CYP98A 5.55% UGT 4.91% 7DLGT 4.08% UFGT 3.9% IFS 3.75% POD 3.73%
Other Families 62.5%
More Families (96)
4CL 189 3.65% CYP76 189 3.65% T3O 153 2.96% F3H 153 2.96% DWF4/CYP90B1 124 2.4% NMT 117 2.26% H6H 105 2.03% CAD 98 1.89% BR6OX2/CYP85A2 90 1.74% F3'H/CYP75B 85 1.64% STR 82 1.58% CODM/T6ODM 72 1.39% CAS 66 1.28% GS 65 1.26% LAC 65 1.26% TRI/TRII 61 1.18% CYP71 52 1.01% IFR 50 0.97% CSE 49 0.95% TPS 48 0.93% SGD 47 0.91% TAT 47 0.91% HCT 46 0.89% ANR 45 0.87% COMT 45 0.87% GES 44 0.85% SMT1/SMT2/SMT3 44 0.85% IO 43 0.83% PMT 41 0.79% 7DLH 41 0.79% PYKS 40 0.77% CYP90D1 39 0.75% F3'5'H/CYP75A 37 0.72% T16H 36 0.7% BR6OX1/CYP85A1 36 0.7% RAS 34 0.66% F5H/CYP84A 33 0.64% BBE 32 0.62% SLS 32 0.62% CCR 31 0.6% LAMT 30 0.58% PAL 30 0.58% COR 28 0.54% NCS 25 0.48% G8O/G8H 25 0.48% 8HGO 23 0.44% FNS 22 0.43% 16OMT 20 0.39% CYP51G1 20 0.39% SQE 17 0.33% DFR 15 0.29% CHS 15 0.29% ANS/LDOX 14 0.27% CYP719 13 0.25% CNMT 13 0.25% MPO 13 0.25% CPD/CYP90A1 13 0.25% FPPS 12 0.23% CPR 11 0.21% SQS/FDFT1 11 0.21% ROT3/CYP90C1 11 0.21% ISY 9 0.17% CCoAOMT 9 0.17% MVD 8 0.15% HPPR 7 0.14% DXS 7 0.14% HMGR 7 0.14% AACT 7 0.14% CYP80B1 6 0.12% TDC 5 0.1% DET2 5 0.1% CPI1 5 0.1% GGPPS 5 0.1% MCT/IspD 5 0.1% XMT_MXMT_DXMT 4 0.08% ADC 4 0.08% TYDC_DDC 4 0.08% CHI 4 0.08% SMO1/SMO2 4 0.08% PMK 4 0.08% 6OMT_4OMT_SOMT 3 0.06% FLS 3 0.06% HYD1 3 0.06% DWF1 3 0.06% HMGS 3 0.06% MVK 3 0.06% HDR/IspH 3 0.06% HDS/IspG 3 0.06% FK 2 0.04% DWF5 2 0.04% DWF7 2 0.04% MDS/IspF 2 0.04% DXR 2 0.04% IDI 2 0.04% CYP80F1 1 0.02% CMK/IspE 1 0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 643 19 UGT (244) View species results
Alkaloid pathway 495 20 7DLGT (114) View species results
Phenylpropanoid pathway 453 12 POD (180) View species results
Flavonoid pathway 293 13 UFGT (187) View species results
Rosmarinic acid pathway 194 7 C4H (78) View species results
Steroid pathway 122 12 CAS (54) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1868 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 371 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: BAHD
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Gene Pathway Family Confidence Status Best Target
genome_MABA036152 Terpenoid BAHD low borderline BAHD__00073__sp_Q9FF86_DCR_ARATH
genome_MABA036154 Terpenoid BAHD medium pass BAHD__00073__sp_Q9FF86_DCR_ARATH
genome_MABA036185 Terpenoid BAHD medium pass BAHD__00081__sp_Q9LJB4_5MAT_ARATH
genome_MABA036355 Terpenoid BAHD low borderline BAHD__00016__sp_D4NUX0_HCT1_ACTRA
genome_MABA036397 Terpenoid BAHD medium pass BAHD__00035__sp_Q0WQK2_ZDHC9_ARATH
genome_MABA036426 Terpenoid BAHD low borderline BAHD__00089__sp_Q9SB58_ZDH19_ARATH
genome_MABA036537 Terpenoid BAHD medium pass BAHD__00058__sp_Q8LG50_LPAT2_ARATH
genome_MABA036622 Terpenoid BAHD medium pass BAHD__00055__sp_Q8H780_SCP13_ARATH
genome_MABA037089 Terpenoid BAHD medium pass BAHD__00032__sp_P0DO84_AT_STRNX
genome_MABA037090 Terpenoid BAHD low borderline BAHD__00032__sp_P0DO84_AT_STRNX
genome_MABA037103 Terpenoid BAHD low borderline BAHD__00015__sp_D2Y3X2_PUN1_CAPAN
genome_MABA037104 Terpenoid BAHD medium pass BAHD__00024__sp_O23393_BIA1_ARATH
genome_MABA037105 Terpenoid BAHD medium pass BAHD__00024__sp_O23393_BIA1_ARATH
genome_MABA037106 Terpenoid BAHD low borderline BAHD__00032__sp_P0DO84_AT_STRNX
genome_MABA037174 Terpenoid BAHD low borderline BAHD__00025__sp_O64810_SCP10_ARATH
genome_MABA037520 Terpenoid BAHD medium pass BAHD__00047__sp_Q5KS41_WSD11_ARATH
genome_MABA037966 Terpenoid BAHD medium pass BAHD__00071__sp_Q9CAY3_GPAT5_ARATH
genome_MABA038156 Terpenoid BAHD medium pass BAHD__00036__sp_Q10L01_ZDHC9_ORYSJ
genome_MABA038338 Terpenoid BAHD medium pass BAHD__00097__sp_Q9ZV87_NAPES_ARATH
genome_MABA038383 Terpenoid BAHD medium pass BAHD__00097__sp_Q9ZV87_NAPES_ARATH
genome_MABA038400 Terpenoid BAHD low borderline BAHD__00047__sp_Q5KS41_WSD11_ARATH
genome_MABA038403 Terpenoid BAHD low borderline BAHD__00047__sp_Q5KS41_WSD11_ARATH
genome_MABA038431 Terpenoid BAHD medium pass BAHD__00012__sp_A1XWY7_CFAT_PETHY
genome_MABA038490 Terpenoid BAHD low borderline BAHD__00012__sp_A1XWY7_CFAT_PETHY
genome_MABA038491 Terpenoid BAHD low borderline BAHD__00012__sp_A1XWY7_CFAT_PETHY
genome_MABA038667 Terpenoid BAHD medium pass BAHD__00085__sp_Q9M1K5_ZDH13_ARATH
genome_MABA038794 Terpenoid BAHD low borderline BAHD__00037__sp_Q3EBC2_ZDHC5_ARATH
genome_MABA039085 Terpenoid BAHD low borderline BAHD__00055__sp_Q8H780_SCP13_ARATH
genome_MABA039148 Terpenoid BAHD medium pass BAHD__00035__sp_Q0WQK2_ZDHC9_ARATH
genome_MABA039284 Terpenoid BAHD medium pass BAHD__00032__sp_P0DO84_AT_STRNX
genome_MABA039286 Terpenoid BAHD medium pass BAHD__00032__sp_P0DO84_AT_STRNX
genome_MABA039288 Terpenoid BAHD medium pass BAHD__00032__sp_P0DO84_AT_STRNX
genome_MABA039340 Terpenoid BAHD medium pass BAHD__00039__sp_Q3ZPN4_ACMAT_VITLA
genome_MABA039341 Terpenoid BAHD low borderline BAHD__00039__sp_Q3ZPN4_ACMAT_VITLA
genome_MABA039342 Terpenoid BAHD medium pass BAHD__00039__sp_Q3ZPN4_ACMAT_VITLA
genome_MABA039394 Terpenoid BAHD medium pass BAHD__00074__sp_Q9FFQ7_FACT_ARATH
genome_MABA039617 Terpenoid BAHD low borderline BAHD__00047__sp_Q5KS41_WSD11_ARATH
genome_MABA039664 Terpenoid BAHD medium pass BAHD__00063__sp_Q93VV0_ZDHC6_ARATH
genome_MABA039720 Terpenoid BAHD medium pass BAHD__00081__sp_Q9LJB4_5MAT_ARATH
genome_MABA039721 Terpenoid BAHD medium pass BAHD__00081__sp_Q9LJB4_5MAT_ARATH
genome_MABA039722 Terpenoid BAHD medium pass BAHD__00081__sp_Q9LJB4_5MAT_ARATH
genome_MABA039723 Terpenoid BAHD medium pass BAHD__00081__sp_Q9LJB4_5MAT_ARATH
genome_MABA040014 Terpenoid BAHD medium pass BAHD__00093__sp_Q9SV07_ASAT1_ARATH
genome_MABA040016 Terpenoid BAHD medium pass BAHD__00093__sp_Q9SV07_ASAT1_ARATH
genome_MABA040017 Terpenoid BAHD medium pass BAHD__00093__sp_Q9SV07_ASAT1_ARATH
genome_MABA040214 Terpenoid BAHD medium pass BAHD__00096__sp_Q9XGY6_WAXS1_SIMCH
genome_MABA040250 Terpenoid BAHD medium pass BAHD__00081__sp_Q9LJB4_5MAT_ARATH
genome_MABA040563 Terpenoid BAHD low borderline BAHD__00016__sp_D4NUX0_HCT1_ACTRA
genome_MABA040567 Terpenoid BAHD low borderline BAHD__00016__sp_D4NUX0_HCT1_ACTRA
genome_MABA041299 Terpenoid BAHD low borderline BAHD__00073__sp_Q9FF86_DCR_ARATH