Malus baccata (malus_baccata)
Imported from atlas release summary for Malus baccata.
2200
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
2200
Candidate Genes
C4H
5.95%
BAHD
5.62%
C3'H/CYP98A
5.55%
UGT
4.91%
7DLGT
4.08%
UFGT
3.9%
IFS
3.75%
POD
3.73%
Other Families
62.5%
More Families (96)
4CL
189
3.65%
CYP76
189
3.65%
T3O
153
2.96%
F3H
153
2.96%
DWF4/CYP90B1
124
2.4%
NMT
117
2.26%
H6H
105
2.03%
CAD
98
1.89%
BR6OX2/CYP85A2
90
1.74%
F3'H/CYP75B
85
1.64%
STR
82
1.58%
CODM/T6ODM
72
1.39%
CAS
66
1.28%
GS
65
1.26%
LAC
65
1.26%
TRI/TRII
61
1.18%
CYP71
52
1.01%
IFR
50
0.97%
CSE
49
0.95%
TPS
48
0.93%
SGD
47
0.91%
TAT
47
0.91%
HCT
46
0.89%
ANR
45
0.87%
COMT
45
0.87%
GES
44
0.85%
SMT1/SMT2/SMT3
44
0.85%
IO
43
0.83%
PMT
41
0.79%
7DLH
41
0.79%
PYKS
40
0.77%
CYP90D1
39
0.75%
F3'5'H/CYP75A
37
0.72%
T16H
36
0.7%
BR6OX1/CYP85A1
36
0.7%
RAS
34
0.66%
F5H/CYP84A
33
0.64%
BBE
32
0.62%
SLS
32
0.62%
CCR
31
0.6%
LAMT
30
0.58%
PAL
30
0.58%
COR
28
0.54%
NCS
25
0.48%
G8O/G8H
25
0.48%
8HGO
23
0.44%
FNS
22
0.43%
16OMT
20
0.39%
CYP51G1
20
0.39%
SQE
17
0.33%
DFR
15
0.29%
CHS
15
0.29%
ANS/LDOX
14
0.27%
CYP719
13
0.25%
CNMT
13
0.25%
MPO
13
0.25%
CPD/CYP90A1
13
0.25%
FPPS
12
0.23%
CPR
11
0.21%
SQS/FDFT1
11
0.21%
ROT3/CYP90C1
11
0.21%
ISY
9
0.17%
CCoAOMT
9
0.17%
MVD
8
0.15%
HPPR
7
0.14%
DXS
7
0.14%
HMGR
7
0.14%
AACT
7
0.14%
CYP80B1
6
0.12%
TDC
5
0.1%
DET2
5
0.1%
CPI1
5
0.1%
GGPPS
5
0.1%
MCT/IspD
5
0.1%
XMT_MXMT_DXMT
4
0.08%
ADC
4
0.08%
TYDC_DDC
4
0.08%
CHI
4
0.08%
SMO1/SMO2
4
0.08%
PMK
4
0.08%
6OMT_4OMT_SOMT
3
0.06%
FLS
3
0.06%
HYD1
3
0.06%
DWF1
3
0.06%
HMGS
3
0.06%
MVK
3
0.06%
HDR/IspH
3
0.06%
HDS/IspG
3
0.06%
FK
2
0.04%
DWF5
2
0.04%
DWF7
2
0.04%
MDS/IspF
2
0.04%
DXR
2
0.04%
IDI
2
0.04%
CYP80F1
1
0.02%
CMK/IspE
1
0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 643 | 19 | UGT (244) | View species results |
| Alkaloid pathway | 495 | 20 | 7DLGT (114) | View species results |
| Phenylpropanoid pathway | 453 | 12 | POD (180) | View species results |
| Flavonoid pathway | 293 | 13 | UFGT (187) | View species results |
| Rosmarinic acid pathway | 194 | 7 | C4H (78) | View species results |
| Steroid pathway | 122 | 12 | CAS (54) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 1868 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 371 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: STR
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| genome_MABA023915 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| genome_MABA026431 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| genome_MABA027981 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| genome_MABA028795 | Alkaloid | STR | low | borderline | STR__00002__sp_P68175_STSY_RAUSE |
| genome_MABA030847 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| genome_MABA030995 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| genome_MABA031085 | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| genome_MABA032139 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| genome_MABA032506 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| genome_MABA032947 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| genome_MABA033030 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| genome_MABA035759 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| genome_MABA036142 | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| genome_MABA036579 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| genome_MABA036711 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| genome_MABA036822 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| genome_MABA036891 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| genome_MABA036892 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| genome_MABA037709 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| genome_MABA038488 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| genome_MABA038489 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| genome_MABA038892 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| genome_MABA039405 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| genome_MABA039513 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| genome_MABA040525 | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| genome_MABA041804 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| genome_MABA043021 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| genome_MABA043022 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| genome_MABA043400 | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| genome_MABA044145 | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| genome_MABA044146 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| genome_MABA045381 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |