PlantSME Plant secondary metabolism enzyme database

Manihot esculenta (manihot_esculenta)

Imported from atlas release summary for Manihot esculenta.

3128
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 928 19 BAHD (426) View species results
Alkaloid pathway 795 23 NMT (170) View species results
Phenylpropanoid pathway 618 11 POD (289) View species results
Flavonoid pathway 295 9 UFGT (185) View species results
Steroid pathway 248 13 CAS (91) View species results
Rosmarinic acid pathway 244 7 C4H (111) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 2844 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 642 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CPR
Reset
Gene Pathway Family Confidence Status Best Target
Mesc01G0000970.1 Rosmarinic Acid CPR low borderline CPR__00007__sp_Q96327_EBP1_ARATH
Mesc01G0000970.2 Rosmarinic Acid CPR low borderline CPR__00007__sp_Q96327_EBP1_ARATH
Mesc01G0000970.3 Rosmarinic Acid CPR low borderline CPR__00007__sp_Q96327_EBP1_ARATH
Mesc01G0011170.1 Rosmarinic Acid CPR medium pass CPR__00003__sp_C5YJG8_NCPR_SORBI
Mesc01G0011170.2 Rosmarinic Acid CPR medium pass CPR__00003__sp_C5YJG8_NCPR_SORBI
Mesc01G0011170.3 Rosmarinic Acid CPR low borderline CPR__00001__sp_A0A2U1LIM9_NCPR1_ARTAN
Mesc09G0011480.1 Rosmarinic Acid CPR medium pass CPR__00007__sp_Q96327_EBP1_ARATH
Mesc09G0011480.2 Rosmarinic Acid CPR medium pass CPR__00007__sp_Q96327_EBP1_ARATH
Mesc14G0015110.1 Rosmarinic Acid CPR medium pass CPR__00009__sp_Q9SUM3_NCPR2_ARATH
Mesc18G0001720.1 Rosmarinic Acid CPR low borderline CPR__00003__sp_C5YJG8_NCPR_SORBI
Mesc18G0006750.1 Rosmarinic Acid CPR medium pass CPR__00008__sp_Q9SB48_NCPR1_ARATH
Mesc18G0006770.1 Rosmarinic Acid CPR medium pass CPR__00008__sp_Q9SB48_NCPR1_ARATH
Mesc18G0006770.2 Rosmarinic Acid CPR medium pass CPR__00008__sp_Q9SB48_NCPR1_ARATH
Mesc18G0006780.1 Rosmarinic Acid CPR medium pass CPR__00008__sp_Q9SB48_NCPR1_ARATH