Manihot esculenta (manihot_esculenta)
Imported from atlas release summary for Manihot esculenta.
3849
Candidate Protein Records
3128
Pathway-Level Records
7619
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
- Download candidate protein FASTA for this species
Pathway Coverage
6
Pathways
Family Distribution
7619
Family-Level Calls
BAHD
6.75%
C3'H/CYP98A
5.93%
C4H
5.74%
4CL
4.29%
IFS
4.15%
NMT
4.13%
POD
3.95%
T3O
3.82%
Other Families
61.24%
More Families (96)
CYP76
259
3.4%
UGT
215
2.82%
DWF4/CYP90B1
214
2.81%
UFGT
199
2.61%
7DLGT
196
2.57%
F3H
179
2.35%
CAD
171
2.24%
F3'H/CYP75B
152
2.0%
SMT1/SMT2/SMT3
137
1.8%
CYP71
129
1.69%
STR
128
1.68%
SGD
122
1.6%
CODM/T6ODM
108
1.42%
CAS
101
1.33%
TRI/TRII
100
1.31%
CYP90D1
99
1.3%
PMT
91
1.19%
BR6OX2/CYP85A2
83
1.09%
IFR
79
1.04%
TPS
79
1.04%
H6H
73
0.96%
GES
73
0.96%
RAS
70
0.92%
ANR
67
0.88%
GS
65
0.85%
IO
59
0.77%
HCT
58
0.76%
COMT
57
0.75%
CSE
55
0.72%
LAC
55
0.72%
16OMT
54
0.71%
SLS
54
0.71%
7DLH
49
0.64%
FNS
47
0.62%
PYKS
43
0.56%
TAT
42
0.55%
CYP51G1
41
0.54%
T16H
40
0.53%
LAMT
39
0.51%
NCS
37
0.49%
CNMT
36
0.47%
CCR
35
0.46%
SQE
34
0.45%
8HGO
33
0.43%
COR
33
0.43%
F5H/CYP84A
33
0.43%
FPPS
33
0.43%
ROT3/CYP90C1
30
0.39%
BR6OX1/CYP85A1
26
0.34%
CPD/CYP90A1
25
0.33%
F3'5'H/CYP75A
23
0.3%
CCoAOMT
23
0.3%
ANS/LDOX
22
0.29%
BBE
21
0.28%
PAL
21
0.28%
DFR
21
0.28%
G8O/G8H
20
0.26%
MVD
18
0.24%
CHS
16
0.21%
DXS
16
0.21%
MPO
14
0.18%
CPR
14
0.18%
SQS/FDFT1
13
0.17%
AACT
13
0.17%
HPPR
11
0.14%
MVK
11
0.14%
TYDC_DDC
10
0.13%
GGPPS
9
0.12%
CHI
8
0.11%
SMO1/SMO2
8
0.11%
DWF7
8
0.11%
DET2
8
0.11%
MCT/IspD
8
0.11%
ISY
7
0.09%
CYP719
7
0.09%
HMGR
7
0.09%
ADC
6
0.08%
PMK
6
0.08%
HDR/IspH
6
0.08%
CYP80B1
5
0.07%
TDC
5
0.07%
6OMT_4OMT_SOMT
5
0.07%
CPI1
4
0.05%
DWF1
4
0.05%
CMK/IspE
4
0.05%
HDS/IspG
4
0.05%
ODC
3
0.04%
FK
3
0.04%
IDI
3
0.04%
XMT_MXMT_DXMT
2
0.03%
FLS
2
0.03%
HYD1
2
0.03%
DWF5
2
0.03%
HMGS
2
0.03%
MDS/IspF
2
0.03%
DXR
2
0.03%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Pathway-Level Records | Detected Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 928 | 19 | BAHD (426) | View species results |
| Alkaloid pathway | 795 | 23 | NMT (170) | View species results |
| Phenylpropanoid pathway | 618 | 11 | POD (289) | View species results |
| Flavonoid pathway | 295 | 9 | UFGT (185) | View species results |
| Steroid pathway | 248 | 13 | CAS (91) | View species results |
| Rosmarinic acid pathway | 244 | 7 | C4H (111) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Detected families | Assignment calls | Included families |
|---|---|---|---|
| P450/oxygenase | 23 | 2844 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 642 | BAHD, HCT, RAS |
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Phenylpropanoid pathway
| Protein/Isoform Record | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| Mesc18G0015080.1 | Phenylpropanoid | POD | medium | pass | POD__00019__sp_Q949Y3_PPA26_ARATH |
| Mesc18G0015110.1 | Phenylpropanoid | POD | medium | pass | POD__00001__sp_A5H452_PER70_MAIZE |
| MescScaffold1090003850.1 | Phenylpropanoid | POD | medium | pass | POD__00021__sp_Q9LEH3_PER15_IPOBA |
| MescScaffold1090003850.2 | Phenylpropanoid | POD | medium | pass | POD__00021__sp_Q9LEH3_PER15_IPOBA |
| MescScaffold4980009630.1 | Phenylpropanoid | POD | medium | pass | POD__00002__sp_A5H8G4_PER1_MAIZE |
| MescScaffold6620011600.1 | Phenylpropanoid | POD | medium | pass | POD__00001__sp_A5H452_PER70_MAIZE |
| MescScaffold6620011610.1 | Phenylpropanoid | POD | medium | pass | POD__00001__sp_A5H452_PER70_MAIZE |
| MescScaffold6620011620.1 | Phenylpropanoid | POD | medium | pass | POD__00013__sp_Q4W1I8_PER1_ZINEL |
| MescScaffold6620011630.1 | Phenylpropanoid | POD | medium | pass | POD__00001__sp_A5H452_PER70_MAIZE |
| MescScaffold6660011660.1 | Phenylpropanoid | POD | medium | pass | POD__00019__sp_Q949Y3_PPA26_ARATH |
| MescScaffold6660011660.2 | Phenylpropanoid | POD | medium | pass | POD__00019__sp_Q949Y3_PPA26_ARATH |
| MescScaffold6660011660.3 | Phenylpropanoid | POD | medium | pass | POD__00019__sp_Q949Y3_PPA26_ARATH |
| MescScaffold6660011660.4 | Phenylpropanoid | POD | medium | pass | POD__00019__sp_Q949Y3_PPA26_ARATH |
| MescScaffold6660011660.5 | Phenylpropanoid | POD | medium | pass | POD__00019__sp_Q949Y3_PPA26_ARATH |
| MescScaffold6840012030.1 | Phenylpropanoid | POD | medium | pass | POD__00028__sp_Q9ZVD5_AGO4_ARATH |
| MescScaffold7820014430.1 | Phenylpropanoid | POD | medium | pass | POD__00007__sp_P0C5C9_REHYA_ORYSJ |
| MescScaffold8230015040.1 | Phenylpropanoid | POD | medium | pass | POD__00021__sp_Q9LEH3_PER15_IPOBA |