Marchantia polymorpha (marchantia_polymorpha)
Imported from atlas release summary for Marchantia polymorpha.
908
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
908
Candidate Genes
POD
10.57%
C4H
6.69%
C3'H/CYP98A
5.83%
BAHD
5.11%
CYP76
4.38%
NMT
3.71%
4CL
3.12%
IFS
2.67%
Other Families
57.93%
More Families (95)
UFGT
53
2.39%
DWF4/CYP90B1
52
2.35%
UGT
51
2.3%
T3O
49
2.21%
7DLGT
49
2.21%
STR
48
2.17%
BR6OX2/CYP85A2
48
2.17%
F3'H/CYP75B
43
1.94%
PAL
39
1.76%
PYKS
36
1.63%
F3H
35
1.58%
COMT
32
1.45%
CHS
29
1.31%
CAD
28
1.27%
GS
26
1.17%
G8O/G8H
26
1.17%
F3'5'H/CYP75A
26
1.17%
TRI/TRII
25
1.13%
IFR
24
1.08%
TPS
24
1.08%
CODM/T6ODM
23
1.04%
IO
23
1.04%
CYP71
22
0.99%
CSE
21
0.95%
HCT
21
0.95%
RAS
20
0.9%
16OMT
19
0.86%
SMT1/SMT2/SMT3
18
0.81%
BR6OX1/CYP85A1
18
0.81%
ANR
16
0.72%
CAS
16
0.72%
COR
13
0.59%
T16H
13
0.59%
H6H
13
0.59%
CPD/CYP90A1
13
0.59%
8HGO
11
0.5%
SLS
11
0.5%
LAMT
11
0.5%
CYP719
10
0.45%
FPPS
10
0.45%
CNMT
9
0.41%
7DLH
9
0.41%
FNS
9
0.41%
CYP90D1
9
0.41%
AACT
9
0.41%
CCR
8
0.36%
CPR
8
0.36%
BBE
7
0.32%
CYP80B1
7
0.32%
GES
7
0.32%
CCoAOMT
7
0.32%
TAT
7
0.32%
ROT3/CYP90C1
7
0.32%
MVK
7
0.32%
SGD
6
0.27%
CYP80F1
6
0.27%
NCS
6
0.27%
SQS/FDFT1
6
0.27%
PMT
5
0.23%
DFR
4
0.18%
ANS/LDOX
4
0.18%
F5H/CYP84A
4
0.18%
LAC
4
0.18%
GGPPS
4
0.18%
MPO
3
0.14%
TYDC_DDC
3
0.14%
ISY
3
0.14%
CHI
3
0.14%
SMO1/SMO2
3
0.14%
DET2
3
0.14%
DWF5
3
0.14%
CYP51G1
3
0.14%
MVD
3
0.14%
DXR
3
0.14%
ODC
2
0.09%
HPPR
2
0.09%
DWF1
2
0.09%
HYD1
2
0.09%
DWF7
2
0.09%
DXS
2
0.09%
PMK
2
0.09%
ADC
1
0.05%
TDC
1
0.05%
FLS
1
0.05%
CPI1
1
0.05%
SQE
1
0.05%
FK
1
0.05%
CMK/IspE
1
0.05%
MDS/IspF
1
0.05%
HMGR
1
0.05%
MCT/IspD
1
0.05%
IDI
1
0.05%
HMGS
1
0.05%
HDS/IspG
1
0.05%
HDR/IspH
1
0.05%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Phenylpropanoid pathway | 325 | 11 | POD (226) | View species results |
| Terpenoid pathway | 194 | 19 | BAHD (68) | View species results |
| Alkaloid pathway | 160 | 18 | PYKS (28) | View species results |
| Flavonoid pathway | 107 | 8 | UFGT (45) | View species results |
| Rosmarinic acid pathway | 82 | 7 | C4H (49) | View species results |
| Steroid pathway | 40 | 12 | CAS (15) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 832 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 154 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: TRI/TRII
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| Mpol01G0006380.1 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00002__sp_H9BFQ0_TPRL1_ERYCB |
| Mpol01G0009110.1 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00002__sp_H9BFQ0_TPRL1_ERYCB |
| Mpol01G0009110.2 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00002__sp_H9BFQ0_TPRL1_ERYCB |
| Mpol01G0009120.1 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00002__sp_H9BFQ0_TPRL1_ERYCB |
| Mpol01G0009120.2 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00002__sp_H9BFQ0_TPRL1_ERYCB |
| Mpol01G0016240.1 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00003__sp_H9BFQ1_TPRL2_ERYCB |
| Mpol02G0010310.1 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00009__sp_Q9ZW19_TRNHC_ARATH |
| Mpol02G0010470.1 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00005__sp_P50162_TRN1_DATST |
| Mpol03G0018040.1 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00003__sp_H9BFQ1_TPRL2_ERYCB |
| Mpol03G0018040.2 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00003__sp_H9BFQ1_TPRL2_ERYCB |
| Mpol03G0023260.1 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00002__sp_H9BFQ0_TPRL1_ERYCB |
| Mpol03G0023270.1 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00002__sp_H9BFQ0_TPRL1_ERYCB |
| Mpol03G0023270.2 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00002__sp_H9BFQ0_TPRL1_ERYCB |
| Mpol03G0023280.1 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00003__sp_H9BFQ1_TPRL2_ERYCB |
| Mpol03G0023290.1 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00003__sp_H9BFQ1_TPRL2_ERYCB |
| Mpol04G0014860.1 | Alkaloid | TRI/TRII | low | borderline | TRI_TRII__00005__sp_P50162_TRN1_DATST |
| Mpol05G0000670.1 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00002__sp_H9BFQ0_TPRL1_ERYCB |
| Mpol05G0002540.1 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00003__sp_H9BFQ1_TPRL2_ERYCB |
| Mpol05G0006080.1 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00004__sp_H9BFQ2_TPRL3_ERYCB |
| Mpol06G0011080.1 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00003__sp_H9BFQ1_TPRL2_ERYCB |
| Mpol06G0011120.1 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00003__sp_H9BFQ1_TPRL2_ERYCB |
| Mpol06G0011530.1 | Alkaloid | TRI/TRII | low | borderline | TRI_TRII__00008__sp_Q9ZW18_SAG13_ARATH |
| Mpol07G0006010.1 | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00002__sp_H9BFQ0_TPRL1_ERYCB |
| Mpol07G0012290.1 | Alkaloid | TRI/TRII | medium | borderline | TRI_TRII__00007__sp_Q9ZW16_TRNHA_ARATH |
| Mpol08G0016220.1 | Alkaloid | TRI/TRII | low | borderline | TRI_TRII__00007__sp_Q9ZW16_TRNHA_ARATH |