Marchantia polymorpha (marchantia_polymorpha)
Imported from atlas release summary for Marchantia polymorpha.
1186
Candidate Protein Records
908
Pathway-Level Records
2213
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
- Download candidate protein FASTA for this species
Pathway Coverage
6
Pathways
Family Distribution
2213
Family-Level Calls
POD
10.57%
C4H
6.69%
C3'H/CYP98A
5.83%
BAHD
5.11%
CYP76
4.38%
NMT
3.71%
4CL
3.12%
IFS
2.67%
Other Families
57.93%
More Families (95)
UFGT
53
2.39%
DWF4/CYP90B1
52
2.35%
UGT
51
2.3%
T3O
49
2.21%
7DLGT
49
2.21%
STR
48
2.17%
BR6OX2/CYP85A2
48
2.17%
F3'H/CYP75B
43
1.94%
PAL
39
1.76%
PYKS
36
1.63%
F3H
35
1.58%
COMT
32
1.45%
CHS
29
1.31%
CAD
28
1.27%
GS
26
1.17%
G8O/G8H
26
1.17%
F3'5'H/CYP75A
26
1.17%
TRI/TRII
25
1.13%
IFR
24
1.08%
TPS
24
1.08%
CODM/T6ODM
23
1.04%
IO
23
1.04%
CYP71
22
0.99%
CSE
21
0.95%
HCT
21
0.95%
RAS
20
0.9%
16OMT
19
0.86%
SMT1/SMT2/SMT3
18
0.81%
BR6OX1/CYP85A1
18
0.81%
ANR
16
0.72%
CAS
16
0.72%
COR
13
0.59%
T16H
13
0.59%
H6H
13
0.59%
CPD/CYP90A1
13
0.59%
8HGO
11
0.5%
SLS
11
0.5%
LAMT
11
0.5%
CYP719
10
0.45%
FPPS
10
0.45%
CNMT
9
0.41%
7DLH
9
0.41%
FNS
9
0.41%
CYP90D1
9
0.41%
AACT
9
0.41%
CCR
8
0.36%
CPR
8
0.36%
BBE
7
0.32%
CYP80B1
7
0.32%
GES
7
0.32%
CCoAOMT
7
0.32%
TAT
7
0.32%
ROT3/CYP90C1
7
0.32%
MVK
7
0.32%
SGD
6
0.27%
CYP80F1
6
0.27%
NCS
6
0.27%
SQS/FDFT1
6
0.27%
PMT
5
0.23%
DFR
4
0.18%
ANS/LDOX
4
0.18%
F5H/CYP84A
4
0.18%
LAC
4
0.18%
GGPPS
4
0.18%
MPO
3
0.14%
TYDC_DDC
3
0.14%
ISY
3
0.14%
CHI
3
0.14%
SMO1/SMO2
3
0.14%
DET2
3
0.14%
DWF5
3
0.14%
CYP51G1
3
0.14%
MVD
3
0.14%
DXR
3
0.14%
ODC
2
0.09%
HPPR
2
0.09%
DWF1
2
0.09%
HYD1
2
0.09%
DWF7
2
0.09%
DXS
2
0.09%
PMK
2
0.09%
ADC
1
0.05%
TDC
1
0.05%
FLS
1
0.05%
CPI1
1
0.05%
SQE
1
0.05%
FK
1
0.05%
CMK/IspE
1
0.05%
MDS/IspF
1
0.05%
HMGR
1
0.05%
MCT/IspD
1
0.05%
IDI
1
0.05%
HMGS
1
0.05%
HDS/IspG
1
0.05%
HDR/IspH
1
0.05%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Pathway-Level Records | Detected Families | Top family | Results |
|---|---|---|---|---|
| Phenylpropanoid pathway | 325 | 11 | POD (226) | View species results |
| Terpenoid pathway | 194 | 19 | BAHD (68) | View species results |
| Alkaloid pathway | 160 | 18 | PYKS (28) | View species results |
| Flavonoid pathway | 107 | 8 | UFGT (45) | View species results |
| Rosmarinic acid pathway | 82 | 7 | C4H (49) | View species results |
| Steroid pathway | 40 | 12 | CAS (15) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Detected families | Assignment calls | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 832 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 154 | BAHD, HCT, RAS |
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
| Protein/Isoform Record | Pathway | Family | Confidence | Status |
|---|---|---|---|---|
| Mpol04G0020900.1 | Alkaloid | PYKS | low | borderline |
| Mpol04G0022060.1 | Alkaloid | PYKS | high | pass |
| Mpol07G0014170.1 | Alkaloid | PYKS | high | pass |
| Mpol07G0014210.1 | Alkaloid | PYKS | high | pass |
| Mpol07G0014220.1 | Alkaloid | PYKS | high | pass |
| Mpol07G0014240.1 | Alkaloid | PYKS | high | pass |
| Mpol08G0017630.1 | Alkaloid | PYKS | medium | pass |
| Mpol02G0013130.1 | Alkaloid | SGD | medium | pass |
| Mpol02G0015000.1 | Alkaloid | SGD | low | borderline |
| Mpol02G0017040.1 | Alkaloid | SGD | low | borderline |
| Mpol05G0004940.1 | Alkaloid | SGD | medium | pass |
| Mpol05G0016430.1 | Alkaloid | SGD | medium | pass |
| Mpol05G0016430.2 | Alkaloid | SGD | medium | pass |
| Mpol01G0016680.1 | Alkaloid | SLS | medium | borderline |
| Mpol02G0000130.1 | Alkaloid | SLS | medium | borderline |
| Mpol02G0006640.1 | Alkaloid | SLS | medium | borderline |
| Mpol03G0003160.1 | Alkaloid | SLS | medium | borderline |
| Mpol03G0003180.1 | Alkaloid | SLS | medium | borderline |
| Mpol04G0016730.1 | Alkaloid | SLS | low | borderline |
| Mpol06G0019650.1 | Alkaloid | SLS | medium | borderline |
| Mpol06G0019650.2 | Alkaloid | SLS | medium | borderline |
| Mpol06G0019650.3 | Alkaloid | SLS | medium | borderline |
| Mpol06G0019650.4 | Alkaloid | SLS | medium | borderline |
| Mpol08G0013630.1 | Alkaloid | SLS | medium | borderline |
| Mpol01G0010590.1 | Alkaloid | STR | low | borderline |
| Mpol01G0022920.1 | Alkaloid | STR | low | borderline |
| Mpol01G0023750.1 | Alkaloid | STR | low | borderline |
| Mpol01G0023850.1 | Alkaloid | STR | low | borderline |
| Mpol02G0000680.1 | Alkaloid | STR | low | borderline |
| Mpol02G0003730.1 | Alkaloid | STR | low | borderline |
| Mpol02G0003730.2 | Alkaloid | STR | low | borderline |
| Mpol02G0003730.3 | Alkaloid | STR | low | borderline |
| Mpol02G0003730.4 | Alkaloid | STR | low | borderline |
| Mpol02G0006760.1 | Alkaloid | STR | low | borderline |
| Mpol02G0006760.2 | Alkaloid | STR | low | borderline |
| Mpol02G0007710.1 | Alkaloid | STR | low | borderline |
| Mpol02G0013560.1 | Alkaloid | STR | low | borderline |
| Mpol02G0014200.1 | Alkaloid | STR | low | borderline |
| Mpol02G0015960.1 | Alkaloid | STR | low | borderline |
| Mpol02G0015970.1 | Alkaloid | STR | low | borderline |
| Mpol02G0015990.1 | Alkaloid | STR | low | borderline |
| Mpol02G0017110.1 | Alkaloid | STR | medium | pass |
| Mpol02G0020280.1 | Alkaloid | STR | low | borderline |
| Mpol02G0020710.1 | Alkaloid | STR | low | borderline |
| Mpol03G0015660.1 | Alkaloid | STR | medium | pass |
| Mpol03G0017170.1 | Alkaloid | STR | low | borderline |
| Mpol03G0017560.1 | Alkaloid | STR | low | borderline |
| Mpol03G0017560.2 | Alkaloid | STR | low | borderline |
| Mpol03G0018790.1 | Alkaloid | STR | low | borderline |
| Mpol04G0001440.1 | Alkaloid | STR | low | borderline |