Marsdenia tenacissima (marsdenia_tenacissima)
Imported from atlas release summary for Marsdenia tenacissima.
1596
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
1596
Candidate Genes
C4H
6.36%
C3'H/CYP98A
6.26%
BAHD
5.2%
UGT
4.22%
IFS
4.14%
UFGT
4.14%
7DLGT
4.07%
T3O
3.89%
Other Families
61.72%
More Families (95)
CYP76
150
3.79%
4CL
132
3.33%
POD
120
3.03%
F3H
114
2.88%
DWF4/CYP90B1
96
2.42%
TRI/TRII
85
2.15%
F3'H/CYP75B
82
2.07%
BR6OX2/CYP85A2
81
2.05%
TPS
80
2.02%
GES
79
1.99%
CODM/T6ODM
66
1.67%
CAD
66
1.67%
CYP71
65
1.64%
CAS
64
1.62%
STR
61
1.54%
NMT
59
1.49%
H6H
55
1.39%
SMT1/SMT2/SMT3
47
1.19%
LAC
41
1.04%
CSE
37
0.93%
HCT
34
0.86%
CYP90D1
34
0.86%
RAS
32
0.81%
COMT
31
0.78%
SLS
29
0.73%
GS
29
0.73%
IFR
29
0.73%
F5H/CYP84A
29
0.73%
IO
27
0.68%
PYKS
25
0.63%
G8O/G8H
24
0.61%
SGD
24
0.61%
BBE
24
0.61%
ANR
24
0.61%
T16H
23
0.58%
16OMT
23
0.58%
TAT
23
0.58%
CCR
21
0.53%
NCS
20
0.51%
7DLH
18
0.45%
F3'5'H/CYP75A
18
0.45%
PAL
18
0.45%
LAMT
17
0.43%
CYP51G1
17
0.43%
PMT
16
0.4%
FNS
16
0.4%
TDC
15
0.38%
BR6OX1/CYP85A1
14
0.35%
ANS/LDOX
13
0.33%
FPPS
13
0.33%
CNMT
12
0.3%
CPD/CYP90A1
12
0.3%
COR
11
0.28%
8HGO
10
0.25%
DFR
10
0.25%
CYP719
8
0.2%
MPO
8
0.2%
CCoAOMT
8
0.2%
CYP80B1
7
0.18%
CHS
6
0.15%
ROT3/CYP90C1
6
0.15%
AACT
6
0.15%
CPR
5
0.13%
DXS
5
0.13%
GGPPS
5
0.13%
HPPR
4
0.1%
SMO1/SMO2
4
0.1%
SQS/FDFT1
4
0.1%
ADC
3
0.08%
ISY
3
0.08%
XMT_MXMT_DXMT
3
0.08%
CHI
3
0.08%
FLS
3
0.08%
DWF1
3
0.08%
SQE
3
0.08%
DET2
3
0.08%
MVK
3
0.08%
MVD
3
0.08%
6OMT_4OMT_SOMT
2
0.05%
CPI1
2
0.05%
HMGR
2
0.05%
MDS/IspF
2
0.05%
CMK/IspE
2
0.05%
PMK
2
0.05%
TYDC_DDC
1
0.03%
FK
1
0.03%
DWF7
1
0.03%
DWF5
1
0.03%
HYD1
1
0.03%
HDS/IspG
1
0.03%
HDR/IspH
1
0.03%
DXR
1
0.03%
IDI
1
0.03%
MCT/IspD
1
0.03%
HMGS
1
0.03%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 483 | 19 | BAHD (159) | View species results |
| Alkaloid pathway | 369 | 18 | TRI/TRII (76) | View species results |
| Phenylpropanoid pathway | 287 | 12 | POD (105) | View species results |
| Flavonoid pathway | 220 | 12 | UFGT (153) | View species results |
| Rosmarinic acid pathway | 152 | 7 | C4H (64) | View species results |
| Steroid pathway | 85 | 11 | CAS (42) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 23 | 1558 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 272 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: NMT
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| marsdenia_tenacissima_EVM0018529.1 | Alkaloid | NMT | medium | pass | NMT__00028__sp_Q2LAE1_ASHH2_ARATH |
| marsdenia_tenacissima_EVM0018653.1 | Alkaloid | NMT | medium | pass | NMT__00066__sp_Q9SU94_ANM11_ARATH |
| marsdenia_tenacissima_EVM0019361.1 | Alkaloid | NMT | medium | borderline | NMT__00053__sp_Q9C6B9_PEAM3_ARATH |
| marsdenia_tenacissima_EVM0019659.1 | Alkaloid | NMT | medium | pass | NMT__00041__sp_Q8GWT4_ANM15_ARATH |
| marsdenia_tenacissima_EVM0020048.1 | Alkaloid | NMT | medium | pass | NMT__00047__sp_Q8VZJ1_ATXR5_ARATH |
| marsdenia_tenacissima_EVM0020399.1 | Alkaloid | NMT | low | borderline | NMT__00039__sp_Q84W92_ANM13_ARATH |
| marsdenia_tenacissima_EVM0020665.3 | Alkaloid | NMT | medium | pass | NMT__00021__sp_O64827_SUVR5_ARATH |
| marsdenia_tenacissima_EVM0021251.1 | Alkaloid | NMT | medium | borderline | NMT__00011__sp_A9X7L0_ANMT_RUTGR |
| marsdenia_tenacissima_EVM0021392.1 | Alkaloid | NMT | low | borderline | NMT__00028__sp_Q2LAE1_ASHH2_ARATH |