PlantSME Plant secondary metabolism enzyme database

Megacarpaea delavayi (megacarpaea_delavayi)

Imported from atlas release summary for Megacarpaea delavayi.

1250
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Algae
Site group 29
Bryophytes
Site group 125
Lycophytes/Ferns
Site group 4
Gymnosperms
Site group 6
Basal angiosperms
Site group 13
Monocots
Site group 117
Eudicots
Current group 495
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
Terpenoid pathway 29.04% Phenylpropanoid pathway 22.08% Alkaloid pathway 22.0% Flavonoid pathway 10.96% Rosmarinic acid pathway 9.2% Steroid pathway 6.72%
Family Distribution
BAHD 7.33% 4CL 5.07% C3'H/CYP98A 5.07% NMT 4.71% C4H 4.71% POD 4.44% IFS 3.28% CYP76 3.12%
Other Families 62.27%
More Families (97)
UGT 94 3.12% F3H 85 2.82% 7DLGT 82 2.72% UFGT 78 2.59% T3O 76 2.52% STR 71 2.35% BR6OX2/CYP85A2 62 2.06% SMT1/SMT2/SMT3 60 1.99% IFR 59 1.96% DWF4/CYP90B1 57 1.89% CODM/T6ODM 49 1.62% CYP71 43 1.43% F3'H/CYP75B 40 1.33% CSE 40 1.33% SGD 39 1.29% H6H 37 1.23% RAS 35 1.16% PYKS 32 1.06% TRI/TRII 32 1.06% ANR 30 0.99% FNS 29 0.96% BBE 27 0.9% PAL 27 0.9% LAC 27 0.9% CAD 27 0.9% CCR 25 0.83% T16H 24 0.8% COMT 23 0.76% TAT 23 0.76% IO 22 0.73% CAS 22 0.73% 8HGO 20 0.66% CPR 19 0.63% GS 17 0.56% SLS 16 0.53% COR 16 0.53% CNMT 16 0.53% BR6OX1/CYP85A1 16 0.53% G8O/G8H 15 0.5% HCT 15 0.5% AACT 15 0.5% PMT 14 0.46% F3'5'H/CYP75A 14 0.46% 7DLH 12 0.4% LAMT 11 0.36% SQS/FDFT1 11 0.36% CYP90D1 11 0.36% CPD/CYP90A1 11 0.36% GGPPS 11 0.36% 16OMT 10 0.33% NCS 10 0.33% MCT/IspD 10 0.33% MVD 10 0.33% GES 9 0.3% CCoAOMT 9 0.3% F5H/CYP84A 9 0.3% CYP51G1 9 0.3% SMO1/SMO2 9 0.3% FPPS 9 0.3% ANS/LDOX 8 0.27% DFR 8 0.27% SQE 8 0.27% ROT3/CYP90C1 8 0.27% TPS 8 0.27% MVK 7 0.23% DXS 7 0.23% MPO 6 0.2% CYP719 6 0.2% TDC 6 0.2% CYP80B1 5 0.17% CHS 5 0.17% DET2 5 0.17% CYP80F1 4 0.13% ISY 4 0.13% HPPR 4 0.13% DWF7 4 0.13% HMGS 4 0.13% PMK 4 0.13% ADC 3 0.1% IDI 3 0.1% MDS/IspF 3 0.1% 6OMT_4OMT_SOMT 2 0.07% XMT_MXMT_DXMT 2 0.07% CHI 2 0.07% FLS 2 0.07% DWF1 2 0.07% DWF5 2 0.07% HMGR 2 0.07% DXR 2 0.07% HDR/IspH 2 0.07% HDS/IspG 2 0.07% CMK/IspE 2 0.07% ODC 1 0.03% TYDC_DDC 1 0.03% HYD1 1 0.03% CPI1 1 0.03% FK 1 0.03%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 363 20 BAHD (166) View species results
Phenylpropanoid pathway 276 12 POD (125) View species results
Alkaloid pathway 275 18 NMT (86) View species results
Flavonoid pathway 137 11 UFGT (73) View species results
Rosmarinic acid pathway 115 7 C4H (37) View species results
Steroid pathway 84 12 SMT1/SMT2/SMT3 (34) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 948 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 271 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: F5H/CYP84A
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Gene Pathway Family Confidence Status Best Target
MdelGWHANWI000024430053620.1 Phenylpropanoid F5H/CYP84A medium borderline F5H_CYP84A__00001__sp_Q42600_C84A1_ARATH
MdelGWHANWI000024470053630.1 Phenylpropanoid F5H/CYP84A medium borderline F5H_CYP84A__00001__sp_Q42600_C84A1_ARATH
MdelGWHANWI000028450060750.1 Phenylpropanoid F5H/CYP84A medium borderline F5H_CYP84A__00001__sp_Q42600_C84A1_ARATH
MdelGWHANWI000138980208390.1 Phenylpropanoid F5H/CYP84A medium borderline F5H_CYP84A__00001__sp_Q42600_C84A1_ARATH
MdelGWHANWI000202790244240.1 Phenylpropanoid F5H/CYP84A medium borderline F5H_CYP84A__00001__sp_Q42600_C84A1_ARATH
MdelGWHANWI000548260283670.2 Phenylpropanoid F5H/CYP84A medium borderline F5H_CYP84A__00001__sp_Q42600_C84A1_ARATH
MdelGWHANWI000621830286390.1 Phenylpropanoid F5H/CYP84A low borderline F5H_CYP84A__00001__sp_Q42600_C84A1_ARATH
MdelGWHANWI000647860287570.1 Phenylpropanoid F5H/CYP84A medium borderline F5H_CYP84A__00001__sp_Q42600_C84A1_ARATH
MdelGWHANWI002777680319340.1 Phenylpropanoid F5H/CYP84A medium pass F5H_CYP84A__00001__sp_Q42600_C84A1_ARATH