PlantSME Plant secondary metabolism enzyme database

Mentha longifolia (mentha_longifolia)

Imported from atlas release summary for Mentha longifolia.

1437
Candidate Genes
101
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Algae
Site group 29
Bryophytes
Site group 125
Lycophytes/Ferns
Site group 4
Gymnosperms
Site group 6
Basal angiosperms
Site group 13
Monocots
Site group 117
Eudicots
Current group 495
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
Terpenoid pathway 27.84% Phenylpropanoid pathway 22.34% Alkaloid pathway 19.69% Rosmarinic acid pathway 14.27% Flavonoid pathway 11.41% Steroid pathway 4.45%
Family Distribution
C4H 8.31% C3'H/CYP98A 7.82% T3O 4.99% CYP76 4.75% BAHD 4.49% IFS 4.29% 4CL 3.82% F3'H/CYP75B 3.32%
Other Families 58.21%
More Families (93)
UGT 115 2.99% POD 110 2.86% 7DLGT 107 2.78% UFGT 106 2.75% DWF4/CYP90B1 96 2.49% CYP71 92 2.39% BR6OX2/CYP85A2 73 1.9% F3H 67 1.74% LAC 62 1.61% CAD 61 1.58% NMT 58 1.51% STR 53 1.38% TPS 53 1.38% GES 52 1.35% CYP51G1 52 1.35% HCT 51 1.32% RAS 50 1.3% PMT 49 1.27% CAS 47 1.22% CODM/T6ODM 44 1.14% T16H 44 1.14% CYP90D1 43 1.12% IFR 35 0.91% G8O/G8H 34 0.88% GS 33 0.86% SMT1/SMT2/SMT3 32 0.83% TRI/TRII 31 0.81% CSE 29 0.75% BBE 28 0.73% COMT 27 0.7% H6H 23 0.6% 16OMT 23 0.6% CPD/CYP90A1 23 0.6% IO 22 0.57% 7DLH 22 0.57% FNS 22 0.57% F5H/CYP84A 22 0.57% PYKS 21 0.55% ANR 20 0.52% LAMT 19 0.49% FPPS 18 0.47% SLS 16 0.42% SGD 16 0.42% NCS 16 0.42% F3'5'H/CYP75A 15 0.39% BR6OX1/CYP85A1 15 0.39% TAT 14 0.36% 8HGO 11 0.29% COR 10 0.26% HPPR 10 0.26% PAL 9 0.23% CCR 9 0.23% CCoAOMT 9 0.23% CYP80B1 8 0.21% MPO 8 0.21% ANS/LDOX 8 0.21% CPR 8 0.21% CHS 7 0.18% CNMT 6 0.16% DFR 6 0.16% SQS/FDFT1 5 0.13% GGPPS 5 0.13% CYP719 4 0.1% TYDC_DDC 4 0.1% AACT 4 0.1% HMGR 4 0.1% HDS/IspG 4 0.1% ROT3/CYP90C1 3 0.08% SQE 3 0.08% DXS 3 0.08% ISY 2 0.05% 6OMT_4OMT_SOMT 2 0.05% CHI 2 0.05% DET2 2 0.05% FK 2 0.05% MCT/IspD 2 0.05% HDR/IspH 2 0.05% MVD 2 0.05% IDI 2 0.05% CYP80F1 1 0.03% ADC 1 0.03% XMT_MXMT_DXMT 1 0.03% TDC 1 0.03% SMO1/SMO2 1 0.03% CPI1 1 0.03% HYD1 1 0.03% DWF5 1 0.03% DXR 1 0.03% HMGS 1 0.03% MDS/IspF 1 0.03% PMK 1 0.03% CMK/IspE 1 0.03% MVK 1 0.03%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 400 19 BAHD (129) View species results
Phenylpropanoid pathway 321 12 POD (105) View species results
Alkaloid pathway 283 21 7DLGT (49) View species results
Rosmarinic acid pathway 205 7 C4H (111) View species results
Flavonoid pathway 164 11 UFGT (101) View species results
Steroid pathway 64 8 CAS (33) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1874 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 274 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: LAMT
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Gene Pathway Family Confidence Status
Mlonscaffold_10_length_330881730007580.1 Alkaloid LAMT low borderline
Mlonscaffold_11_length_299437840019390.1 Alkaloid LAMT low borderline
Mlonscaffold_12_length_296600840030010.1 Alkaloid LAMT low borderline
Mlonscaffold_12_length_296600840039670.1 Alkaloid LAMT medium borderline
Mlonscaffold_2_length_455260290061780.1 Alkaloid LAMT medium pass
Mlonscaffold_2_length_455260290061790.1 Alkaloid LAMT medium pass
Mlonscaffold_2_length_455260290061800.1 Alkaloid LAMT medium borderline
Mlonscaffold_2_length_455260290061810.1 Alkaloid LAMT medium borderline
Mlonscaffold_2_length_455260290061820.1 Alkaloid LAMT medium borderline
Mlonscaffold_2_length_455260290061920.1 Alkaloid LAMT medium pass
Mlonscaffold_2_length_455260290061930.1 Alkaloid LAMT medium pass
Mlonscaffold_2_length_455260290062060.1 Alkaloid LAMT medium borderline
Mlonscaffold_2_length_455260290062070.1 Alkaloid LAMT medium borderline
Mlonscaffold_2_length_455260290069110.1 Alkaloid LAMT medium borderline
Mlonscaffold_3_length_454607550086370.1 Alkaloid LAMT medium borderline
Mlonscaffold_3_length_454607550097160.1 Alkaloid LAMT medium borderline
Mlonscaffold_4_length_442849540101870.1 Alkaloid LAMT medium pass
Mlonscaffold_4_length_442849540101960.1 Alkaloid LAMT medium pass
Mlonscaffold_6_length_375374740138180.1 Alkaloid LAMT medium borderline