PlantSME Plant secondary metabolism enzyme database

Mesotaenium endlicherianum (mesotaenium_endlicherianum)

Imported from atlas release summary for Mesotaenium endlicherianum.

168
Candidate Genes
92
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Algae
Current group 29
Bryophytes
Site group 125
Lycophytes/Ferns
Site group 4
Gymnosperms
Site group 6
Basal angiosperms
Site group 13
Monocots
Site group 117
Eudicots
Site group 495
Species Metadata
Taxon group
Algae
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
Alkaloid pathway 30.95% Terpenoid pathway 28.57% Phenylpropanoid pathway 19.64% Steroid pathway 12.5% Flavonoid pathway 4.17% Rosmarinic acid pathway 4.17%
Family Distribution
NMT 7.39% 4CL 7.19% BAHD 6.39% CSE 5.19% IFR 4.79% POD 4.79% C3'H/CYP98A 3.39% GS 3.19%
Other Families 57.68%
More Families (84)
STR 15 2.99% CYP71 14 2.79% SGD 13 2.59% TRI/TRII 12 2.4% IFS 12 2.4% CAD 12 2.4% C4H 10 2.0% AACT 10 2.0% CAS 8 1.6% DWF4/CYP90B1 8 1.6% LAC 7 1.4% SMT1/SMT2/SMT3 7 1.4% SLS 6 1.2% T3O 6 1.2% CYP76 6 1.2% CNMT 5 1.0% PYKS 5 1.0% FPPS 5 1.0% COR 4 0.8% 8HGO 4 0.8% ANR 4 0.8% COMT 4 0.8% CPR 4 0.8% CPD/CYP90A1 4 0.8% SQS/FDFT1 4 0.8% PMT 3 0.6% TDC 3 0.6% CYP719 3 0.6% UFGT 3 0.6% F3H 3 0.6% PAL 3 0.6% DFR 3 0.6% FNS 3 0.6% DET2 3 0.6% ROT3/CYP90C1 3 0.6% DXS 3 0.6% UGT 3 0.6% 7DLH 2 0.4% 7DLGT 2 0.4% ODC 2 0.4% ADC 2 0.4% LAMT 2 0.4% F3'5'H/CYP75A 2 0.4% TAT 2 0.4% BR6OX2/CYP85A2 2 0.4% SMO1/SMO2 2 0.4% HYD1 2 0.4% DXR 2 0.4% HDS/IspG 2 0.4% GGPPS 2 0.4% CMK/IspE 2 0.4% MVK 2 0.4% HMGR 2 0.4% IDI 2 0.4% MPO 1 0.2% NCS 1 0.2% H6H 1 0.2% ISY 1 0.2% CODM/T6ODM 1 0.2% G8O/G8H 1 0.2% IO 1 0.2% F3'H/CYP75B 1 0.2% CHS 1 0.2% ANS/LDOX 1 0.2% CCR 1 0.2% HPPR 1 0.2% RAS 1 0.2% CPI1 1 0.2% SQE 1 0.2% FK 1 0.2% CYP90D1 1 0.2% CYP51G1 1 0.2% DWF1 1 0.2% BR6OX1/CYP85A1 1 0.2% DWF5 1 0.2% DWF7 1 0.2% HMGS 1 0.2% GPPS 1 0.2% HDR/IspH 1 0.2% MVD 1 0.2% TPS 1 0.2% MCT/IspD 1 0.2% MDS/IspF 1 0.2% PMK 1 0.2%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Alkaloid pathway 52 15 NMT (16) View species results
Terpenoid pathway 48 16 BAHD (22) View species results
Phenylpropanoid pathway 33 6 POD (16) View species results
Steroid pathway 21 11 CAS (6) View species results
Flavonoid pathway 7 4 4CL (2) View species results
Rosmarinic acid pathway 7 4 4CL (2) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 20 101 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T3O
BAHD/acyltransferase 2 33 BAHD, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: TRI/TRII
Reset
Gene Pathway Family Confidence Status Best Target
MendS120009740 Alkaloid TRI/TRII low borderline TRI_TRII__00005__sp_P50162_TRN1_DATST
MendS1550022990 Alkaloid TRI/TRII medium pass TRI_TRII__00002__sp_H9BFQ0_TPRL1_ERYCB
MendS1580024660 Alkaloid TRI/TRII medium pass TRI_TRII__00004__sp_H9BFQ2_TPRL3_ERYCB
MendS1590024960 Alkaloid TRI/TRII low borderline TRI_TRII__00004__sp_H9BFQ2_TPRL3_ERYCB
MendS17560029510 Alkaloid TRI/TRII low borderline TRI_TRII__00005__sp_P50162_TRN1_DATST
MendS220043480 Alkaloid TRI/TRII low borderline TRI_TRII__00005__sp_P50162_TRN1_DATST
MendS3520068730 Alkaloid TRI/TRII low borderline TRI_TRII__00005__sp_P50162_TRN1_DATST
MendS3690071340 Alkaloid TRI/TRII medium pass TRI_TRII__00004__sp_H9BFQ2_TPRL3_ERYCB
MendS370071550 Alkaloid TRI/TRII medium pass TRI_TRII__00004__sp_H9BFQ2_TPRL3_ERYCB
MendS4340080860 Alkaloid TRI/TRII low borderline TRI_TRII__00003__sp_H9BFQ1_TPRL2_ERYCB
MendS5910091920 Alkaloid TRI/TRII low borderline TRI_TRII__00004__sp_H9BFQ2_TPRL3_ERYCB
MendS9500109400 Alkaloid TRI/TRII medium pass TRI_TRII__00001__sp_A7DY56_TRN1_COCOF