PlantSME Plant secondary metabolism enzyme database

Mesua ferrea (mesua_ferrea)

Imported from atlas release summary for Mesua ferrea.

858
Candidate Genes
100
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Algae
Site group 29
Bryophytes
Site group 125
Lycophytes/Ferns
Site group 4
Gymnosperms
Site group 6
Basal angiosperms
Site group 13
Monocots
Site group 117
Eudicots
Current group 495
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
Terpenoid pathway 31.12% Alkaloid pathway 25.17% Phenylpropanoid pathway 20.63% Flavonoid pathway 12.47% Rosmarinic acid pathway 5.83% Steroid pathway 4.78%
Family Distribution
C4H 6.86% C3'H/CYP98A 5.53% BAHD 5.07% CYP76 3.91% UGT 3.62% IFS 3.24% 7DLGT 3.04% UFGT 2.99%
Other Families 65.74%
More Families (92)
T3O 67 2.79% 4CL 66 2.74% F3H 62 2.58% POD 59 2.45% F3'H/CYP75B 52 2.16% NMT 50 2.08% BR6OX2/CYP85A2 49 2.04% COMT 48 2.0% DWF4/CYP90B1 48 2.0% STR 46 1.91% CYP71 44 1.83% CAD 43 1.79% TRI/TRII 39 1.62% LAC 39 1.62% TPS 39 1.62% H6H 38 1.58% CODM/T6ODM 34 1.41% IFR 32 1.33% GES 31 1.29% T16H 30 1.25% G8O/G8H 30 1.25% CAS 30 1.25% FNS 29 1.21% IO 26 1.08% 16OMT 25 1.04% SMT1/SMT2/SMT3 23 0.96% 7DLH 22 0.91% PYKS 21 0.87% SGD 21 0.87% HCT 21 0.87% GS 20 0.83% F5H/CYP84A 20 0.83% CSE 18 0.75% CYP90D1 18 0.75% PMT 17 0.71% TAT 17 0.71% RAS 16 0.67% COR 14 0.58% ANR 14 0.58% CCR 14 0.58% 6OMT_4OMT_SOMT 13 0.54% F3'5'H/CYP75A 13 0.54% ROT3/CYP90C1 13 0.54% CYP51G1 13 0.54% 8HGO 12 0.5% CHS 12 0.5% BBE 10 0.42% ANS/LDOX 10 0.42% LAMT 9 0.37% PAL 9 0.37% CYP80B1 8 0.33% CYP719 8 0.33% NCS 8 0.33% DFR 8 0.33% CPD/CYP90A1 8 0.33% BR6OX1/CYP85A1 8 0.33% CNMT 6 0.25% GGPPS 6 0.25% SLS 4 0.17% CPR 4 0.17% SQS/FDFT1 4 0.17% DXS 4 0.17% TYDC_DDC 3 0.12% MPO 3 0.12% TDC 3 0.12% CCoAOMT 3 0.12% DWF1 3 0.12% HDS/IspG 3 0.12% FPPS 3 0.12% CMK/IspE 3 0.12% AACT 3 0.12% MCT/IspD 3 0.12% CYP80F1 2 0.08% XMT_MXMT_DXMT 2 0.08% FLS 2 0.08% DET2 2 0.08% DWF7 2 0.08% SQE 2 0.08% MVD 2 0.08% HMGR 2 0.08% MVK 2 0.08% ADC 1 0.04% CHI 1 0.04% HPPR 1 0.04% SMO1/SMO2 1 0.04% DWF5 1 0.04% CPI1 1 0.04% HYD1 1 0.04% FK 1 0.04% DXR 1 0.04% HDR/IspH 1 0.04% HMGS 1 0.04%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 267 15 BAHD (85) View species results
Alkaloid pathway 216 22 NMT (28) View species results
Phenylpropanoid pathway 177 12 POD (50) View species results
Flavonoid pathway 107 11 UFGT (57) View species results
Rosmarinic acid pathway 50 6 C4H (20) View species results
Steroid pathway 41 9 CAS (20) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 953 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 159 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: ANS/LDOX
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Gene Pathway Family Confidence Status Best Target
mesua_ferrea_Mesfe214S17565_MESFER Flavonoid ANS/LDOX medium pass ANS_LDOX__00004__sp_O80449_JOX4_ARATH
mesua_ferrea_Mesfe214S17572_MESFER Flavonoid ANS/LDOX medium borderline ANS_LDOX__00004__sp_O80449_JOX4_ARATH
mesua_ferrea_Mesfe22S17740_MESFER Flavonoid ANS/LDOX medium borderline ANS_LDOX__00005__sp_Q96323_LDOX_ARATH
mesua_ferrea_Mesfe237S18438_MESFER Flavonoid ANS/LDOX medium borderline ANS_LDOX__00004__sp_O80449_JOX4_ARATH
mesua_ferrea_Mesfe30S03892_MESFER Flavonoid ANS/LDOX low borderline ANS_LDOX__00001__sp_A0A2R6PI27_LDOX_ACTCC
mesua_ferrea_Mesfe356S22434_MESFER Flavonoid ANS/LDOX medium borderline ANS_LDOX__00004__sp_O80449_JOX4_ARATH
mesua_ferrea_Mesfe36S22487_MESFER Flavonoid ANS/LDOX medium borderline ANS_LDOX__00004__sp_O80449_JOX4_ARATH
mesua_ferrea_Mesfe36S22522_MESFER Flavonoid ANS/LDOX medium borderline ANS_LDOX__00005__sp_Q96323_LDOX_ARATH
mesua_ferrea_Mesfe732S36117_MESFER Flavonoid ANS/LDOX medium pass ANS_LDOX__00004__sp_O80449_JOX4_ARATH
mesua_ferrea_Mesfe9S32575_MESFER Flavonoid ANS/LDOX medium borderline ANS_LDOX__00004__sp_O80449_JOX4_ARATH