PlantSME Plant secondary metabolism enzyme database

Micromonas pusilla (micromonas_pusilla)

Imported from atlas release summary for Micromonas pusilla.

36
Candidate Genes
57
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Algae
Current group 29
Bryophytes
Site group 125
Lycophytes/Ferns
Site group 4
Gymnosperms
Site group 6
Basal angiosperms
Site group 13
Monocots
Site group 117
Eudicots
Site group 495
Species Metadata
Taxon group
Algae
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
Terpenoid pathway 47.22% Alkaloid pathway 16.67% Phenylpropanoid pathway 16.67% Rosmarinic acid pathway 8.33% Flavonoid pathway 5.56% Steroid pathway 5.56%
Family Distribution
NMT 12.69% BAHD 8.96% IFR 4.48% 4CL 4.48% C3'H/CYP98A 4.48% CSE 3.73% STR 2.99% IFS 2.99%
Other Families 55.22%
More Families (49)
C4H 4 2.99% CYP71 4 2.99% TRI/TRII 3 2.24% T3O 3 2.24% CNMT 3 2.24% POD 3 2.24% TAT 3 2.24% FPPS 3 2.24% BR6OX2/CYP85A2 2 1.49% DWF4/CYP90B1 2 1.49% CAS 2 1.49% DET2 2 1.49% SQS/FDFT1 2 1.49% MCT/IspD 2 1.49% CYP76 2 1.49% PMT 1 0.75% 16OMT 1 0.75% IO 1 0.75% H6H 1 0.75% G8O/G8H 1 0.75% GS 1 0.75% TDC 1 0.75% MPO 1 0.75% 8HGO 1 0.75% ODC 1 0.75% NCS 1 0.75% PYKS 1 0.75% CYP80F1 1 0.75% 7DLH 1 0.75% F3H 1 0.75% FNS 1 0.75% F3'5'H/CYP75A 1 0.75% ANR 1 0.75% CCoAOMT 1 0.75% CCR 1 0.75% CAD 1 0.75% CPR 1 0.75% BR6OX1/CYP85A1 1 0.75% SMT1/SMT2/SMT3 1 0.75% CYP90D1 1 0.75% CPI1 1 0.75% MDS/IspF 1 0.75% GGPPS 1 0.75% MVK 1 0.75% UGT 1 0.75% CMK/IspE 1 0.75% DXR 1 0.75% HDS/IspG 1 0.75% DXS 1 0.75%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 17 8 BAHD (6) View species results
Alkaloid pathway 6 3 NMT (3) View species results
Phenylpropanoid pathway 6 3 POD (3) View species results
Rosmarinic acid pathway 3 3 4CL (1) View species results
Flavonoid pathway 2 2 4CL (1) View species results
Steroid pathway 2 2 CPI1 (1) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 15 34 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CYP71, CYP76, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, G8O/G8H, IFS, IO, T3O
BAHD/acyltransferase 1 12 BAHD
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Gene Pathway Family Confidence Status
Mpusscaffold_100015740.1 Flavonoid IFR low borderline
Mpusscaffold_10006220.1 Flavonoid IFR low borderline
Mpusscaffold_10010110.1 Flavonoid IFR low borderline
Mpusscaffold_140032610.1 Flavonoid IFR low borderline
Mpusscaffold_80095600.1 Flavonoid IFR medium pass
Mpusscaffold_90105760.1 Flavonoid IFR low borderline
Mpusscaffold_120021030.1 Flavonoid IFS low borderline
Mpusscaffold_130028430.1 Flavonoid IFS low borderline
Mpusscaffold_50080590.1 Flavonoid IFS low borderline
Mpusscaffold_90106340.1 Flavonoid IFS low borderline
Mpusscaffold_10004400.1 Phenylpropanoid 4CL low borderline
Mpusscaffold_80096470.1 Phenylpropanoid 4CL medium pass
Mpusscaffold_120021030.1 Phenylpropanoid C3'H/CYP98A low borderline
Mpusscaffold_130028430.1 Phenylpropanoid C3'H/CYP98A low borderline
Mpusscaffold_170043070.1 Phenylpropanoid C3'H/CYP98A low borderline
Mpusscaffold_20056890.1 Phenylpropanoid C3'H/CYP98A low borderline
Mpusscaffold_50080590.1 Phenylpropanoid C3'H/CYP98A low borderline
Mpusscaffold_90106340.1 Phenylpropanoid C3'H/CYP98A low borderline
Mpusscaffold_30062260.1 Phenylpropanoid CAD low borderline
Mpusscaffold_150036780.1 Phenylpropanoid CCR low borderline
Mpusscaffold_140032890.1 Phenylpropanoid CCoAOMT low borderline
Mpusscaffold_130027530.1 Phenylpropanoid CSE low borderline
Mpusscaffold_160041500.1 Phenylpropanoid CSE low borderline
Mpusscaffold_30060180.1 Phenylpropanoid CSE medium pass
Mpusscaffold_60088000.1 Phenylpropanoid CSE low borderline
Mpusscaffold_90102440.1 Phenylpropanoid CSE medium pass
Mpusscaffold_100013900.1 Phenylpropanoid POD medium pass
Mpusscaffold_30057470.1 Phenylpropanoid POD medium pass
Mpusscaffold_80096370.1 Phenylpropanoid POD medium pass
Mpusscaffold_10004400.1 Rosmarinic Acid 4CL low borderline
Mpusscaffold_80096470.1 Rosmarinic Acid 4CL medium pass
Mpusscaffold_120021030.1 Rosmarinic Acid C4H low borderline
Mpusscaffold_170043070.1 Rosmarinic Acid C4H low borderline
Mpusscaffold_50080590.1 Rosmarinic Acid C4H low borderline
Mpusscaffold_90106340.1 Rosmarinic Acid C4H low borderline
Mpusscaffold_20052630.1 Rosmarinic Acid CPR medium pass
Mpusscaffold_160039690.1 Rosmarinic Acid TAT low borderline
Mpusscaffold_20049120.1 Rosmarinic Acid TAT medium pass
Mpusscaffold_40068440.1 Rosmarinic Acid TAT low borderline
Mpusscaffold_10003520.1 Steroid BR6OX1/CYP85A1 low borderline
Mpusscaffold_120021030.1 Steroid BR6OX2/CYP85A2 low borderline
Mpusscaffold_20056890.1 Steroid BR6OX2/CYP85A2 low borderline
Mpusscaffold_140030440.1 Steroid CAS low borderline
Mpusscaffold_30064860.1 Steroid CAS low borderline
Mpusscaffold_80100040.1 Steroid CPI1 high pass
Mpusscaffold_170043070.1 Steroid CYP90D1 low borderline
Mpusscaffold_140033070.1 Steroid DET2 medium pass
Mpusscaffold_60085740.1 Steroid DET2 low borderline
Mpusscaffold_130028430.1 Steroid DWF4/CYP90B1 medium borderline
Mpusscaffold_90106340.1 Steroid DWF4/CYP90B1 low borderline