PlantSME Plant secondary metabolism enzyme database

Micromonas pusilla (micromonas_pusilla)

Imported from atlas release summary for Micromonas pusilla.

36
Candidate Genes
57
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Algae
Current group 29
Bryophytes
Site group 125
Lycophytes/Ferns
Site group 4
Gymnosperms
Site group 6
Basal angiosperms
Site group 13
Monocots
Site group 117
Eudicots
Site group 495
Species Metadata
Taxon group
Algae
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
Terpenoid pathway 47.22% Alkaloid pathway 16.67% Phenylpropanoid pathway 16.67% Rosmarinic acid pathway 8.33% Flavonoid pathway 5.56% Steroid pathway 5.56%
Family Distribution
NMT 12.69% BAHD 8.96% IFR 4.48% 4CL 4.48% C3'H/CYP98A 4.48% CSE 3.73% STR 2.99% IFS 2.99%
Other Families 55.22%
More Families (49)
C4H 4 2.99% CYP71 4 2.99% TRI/TRII 3 2.24% T3O 3 2.24% CNMT 3 2.24% POD 3 2.24% TAT 3 2.24% FPPS 3 2.24% BR6OX2/CYP85A2 2 1.49% DWF4/CYP90B1 2 1.49% CAS 2 1.49% DET2 2 1.49% SQS/FDFT1 2 1.49% MCT/IspD 2 1.49% CYP76 2 1.49% PMT 1 0.75% 16OMT 1 0.75% IO 1 0.75% H6H 1 0.75% G8O/G8H 1 0.75% GS 1 0.75% TDC 1 0.75% MPO 1 0.75% 8HGO 1 0.75% ODC 1 0.75% NCS 1 0.75% PYKS 1 0.75% CYP80F1 1 0.75% 7DLH 1 0.75% F3H 1 0.75% FNS 1 0.75% F3'5'H/CYP75A 1 0.75% ANR 1 0.75% CCoAOMT 1 0.75% CCR 1 0.75% CAD 1 0.75% CPR 1 0.75% BR6OX1/CYP85A1 1 0.75% SMT1/SMT2/SMT3 1 0.75% CYP90D1 1 0.75% CPI1 1 0.75% MDS/IspF 1 0.75% GGPPS 1 0.75% MVK 1 0.75% UGT 1 0.75% CMK/IspE 1 0.75% DXR 1 0.75% HDS/IspG 1 0.75% DXS 1 0.75%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 17 8 BAHD (6) View species results
Alkaloid pathway 6 3 NMT (3) View species results
Phenylpropanoid pathway 6 3 POD (3) View species results
Rosmarinic acid pathway 3 3 4CL (1) View species results
Flavonoid pathway 2 2 4CL (1) View species results
Steroid pathway 2 2 CPI1 (1) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 15 34 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CYP71, CYP76, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, G8O/G8H, IFS, IO, T3O
BAHD/acyltransferase 1 12 BAHD
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: BAHD
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Gene Pathway Family Confidence Status Best Target
Mpusscaffold_10001020.1 Terpenoid BAHD medium pass BAHD__00043__sp_Q52T38_ZDH22_ARATH
Mpusscaffold_10010550.1 Terpenoid BAHD low borderline BAHD__00026__sp_O64811_SCP9_ARATH
Mpusscaffold_120021860.1 Terpenoid BAHD medium pass BAHD__00063__sp_Q93VV0_ZDHC6_ARATH
Mpusscaffold_140032900.1 Terpenoid BAHD low borderline BAHD__00065__sp_Q94C49_ZDH18_ARATH
Mpusscaffold_160039160.1 Terpenoid BAHD medium pass BAHD__00052__sp_Q8GWG0_GPAT9_ARATH
Mpusscaffold_160039530.1 Terpenoid BAHD medium pass BAHD__00035__sp_Q0WQK2_ZDHC9_ARATH
Mpusscaffold_170042750.1 Terpenoid BAHD medium pass BAHD__00017__sp_F4IDU4_MBOA1_ARATH
Mpusscaffold_30067060.1 Terpenoid BAHD low borderline BAHD__00037__sp_Q3EBC2_ZDHC5_ARATH
Mpusscaffold_40070440.1 Terpenoid BAHD low borderline BAHD__00051__sp_Q7XA86_ZDH11_ARATH
Mpusscaffold_50080690.1 Terpenoid BAHD low borderline BAHD__00067__sp_Q9ASU1_DGAT2_ARATH
Mpusscaffold_60086540.1 Terpenoid BAHD medium pass BAHD__00077__sp_Q9FNA9_PDAT1_ARATH
Mpusscaffold_90102780.1 Terpenoid BAHD low borderline BAHD__00011__sp_A1A442_DGAT2_RICCO