PlantSME Plant secondary metabolism enzyme database

Micromonas pusilla (micromonas_pusilla)

Imported from atlas release summary for Micromonas pusilla.

36
Candidate Genes
57
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Algae
Current group 29
Bryophytes
Site group 125
Lycophytes/Ferns
Site group 4
Gymnosperms
Site group 6
Basal angiosperms
Site group 13
Monocots
Site group 117
Eudicots
Site group 495
Species Metadata
Taxon group
Algae
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
Terpenoid pathway 47.22% Alkaloid pathway 16.67% Phenylpropanoid pathway 16.67% Rosmarinic acid pathway 8.33% Flavonoid pathway 5.56% Steroid pathway 5.56%
Family Distribution
NMT 12.69% BAHD 8.96% IFR 4.48% 4CL 4.48% C3'H/CYP98A 4.48% CSE 3.73% STR 2.99% IFS 2.99%
Other Families 55.22%
More Families (49)
C4H 4 2.99% CYP71 4 2.99% TRI/TRII 3 2.24% T3O 3 2.24% CNMT 3 2.24% POD 3 2.24% TAT 3 2.24% FPPS 3 2.24% BR6OX2/CYP85A2 2 1.49% DWF4/CYP90B1 2 1.49% CAS 2 1.49% DET2 2 1.49% SQS/FDFT1 2 1.49% MCT/IspD 2 1.49% CYP76 2 1.49% PMT 1 0.75% 16OMT 1 0.75% IO 1 0.75% H6H 1 0.75% G8O/G8H 1 0.75% GS 1 0.75% TDC 1 0.75% MPO 1 0.75% 8HGO 1 0.75% ODC 1 0.75% NCS 1 0.75% PYKS 1 0.75% CYP80F1 1 0.75% 7DLH 1 0.75% F3H 1 0.75% FNS 1 0.75% F3'5'H/CYP75A 1 0.75% ANR 1 0.75% CCoAOMT 1 0.75% CCR 1 0.75% CAD 1 0.75% CPR 1 0.75% BR6OX1/CYP85A1 1 0.75% SMT1/SMT2/SMT3 1 0.75% CYP90D1 1 0.75% CPI1 1 0.75% MDS/IspF 1 0.75% GGPPS 1 0.75% MVK 1 0.75% UGT 1 0.75% CMK/IspE 1 0.75% DXR 1 0.75% HDS/IspG 1 0.75% DXS 1 0.75%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 17 8 BAHD (6) View species results
Alkaloid pathway 6 3 NMT (3) View species results
Phenylpropanoid pathway 6 3 POD (3) View species results
Rosmarinic acid pathway 3 3 4CL (1) View species results
Flavonoid pathway 2 2 4CL (1) View species results
Steroid pathway 2 2 CPI1 (1) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 15 34 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CYP71, CYP76, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, G8O/G8H, IFS, IO, T3O
BAHD/acyltransferase 1 12 BAHD
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Gene Pathway Family Confidence Status
Mpusscaffold_10005230.1 Alkaloid 16OMT low borderline
Mpusscaffold_90106340.1 Alkaloid 7DLH medium borderline
Mpusscaffold_30066770.1 Alkaloid 8HGO medium borderline
Mpusscaffold_180045540.1 Alkaloid CNMT medium borderline
Mpusscaffold_50076460.1 Alkaloid CNMT low borderline
Mpusscaffold_90101510.1 Alkaloid CNMT low borderline
Mpusscaffold_80096820.1 Alkaloid CYP80F1 low borderline
Mpusscaffold_170043070.1 Alkaloid G8O/G8H medium borderline
Mpusscaffold_20053570.1 Alkaloid GS low borderline
Mpusscaffold_130028950.1 Alkaloid H6H low borderline
Mpusscaffold_120021030.1 Alkaloid IO low borderline
Mpusscaffold_30064970.1 Alkaloid MPO high pass
Mpusscaffold_50075890.1 Alkaloid NCS low borderline
Mpusscaffold_100015240.1 Alkaloid NMT low borderline
Mpusscaffold_10004910.1 Alkaloid NMT low borderline
Mpusscaffold_110017070.1 Alkaloid NMT low borderline
Mpusscaffold_120020740.1 Alkaloid NMT low borderline
Mpusscaffold_120021640.1 Alkaloid NMT low borderline
Mpusscaffold_120024040.1 Alkaloid NMT medium pass
Mpusscaffold_160039070.1 Alkaloid NMT low borderline
Mpusscaffold_170042140.1 Alkaloid NMT low borderline
Mpusscaffold_30060520.1 Alkaloid NMT medium borderline
Mpusscaffold_30061340.1 Alkaloid NMT medium pass
Mpusscaffold_30066480.1 Alkaloid NMT low borderline
Mpusscaffold_30066590.1 Alkaloid NMT medium borderline
Mpusscaffold_40072140.1 Alkaloid NMT low borderline
Mpusscaffold_50079140.1 Alkaloid NMT low borderline
Mpusscaffold_60087020.1 Alkaloid NMT low borderline
Mpusscaffold_70090890.1 Alkaloid NMT low borderline
Mpusscaffold_90105640.1 Alkaloid NMT medium pass
Mpusscaffold_30066870.1 Alkaloid ODC low borderline
Mpusscaffold_100011520.1 Alkaloid PMT medium borderline
Mpusscaffold_80095760.1 Alkaloid PYKS low borderline
Mpusscaffold_10006940.1 Alkaloid STR low borderline
Mpusscaffold_130028780.1 Alkaloid STR low borderline
Mpusscaffold_150034870.1 Alkaloid STR low borderline
Mpusscaffold_40070150.1 Alkaloid STR low borderline
Mpusscaffold_130028430.1 Alkaloid T3O low borderline
Mpusscaffold_20056890.1 Alkaloid T3O low borderline
Mpusscaffold_50080590.1 Alkaloid T3O low borderline
Mpusscaffold_30064860.1 Alkaloid TDC low borderline
Mpusscaffold_100012250.1 Alkaloid TRI/TRII medium pass
Mpusscaffold_20053710.1 Alkaloid TRI/TRII medium pass
Mpusscaffold_30059380.1 Alkaloid TRI/TRII low borderline
Mpusscaffold_10004400.1 Flavonoid 4CL low borderline
Mpusscaffold_80096470.1 Flavonoid 4CL medium pass
Mpusscaffold_70094600.1 Flavonoid ANR low borderline
Mpusscaffold_20056890.1 Flavonoid F3'5'H/CYP75A low borderline
Mpusscaffold_130028950.1 Flavonoid F3H low borderline
Mpusscaffold_170043070.1 Flavonoid FNS medium borderline