PlantSME Plant secondary metabolism enzyme database

Mimosa pudica (mimosa_pudica)

Imported from atlas release summary for Mimosa pudica.

2159
Candidate Protein Records
1773
Pathway-Level Records
4700
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Algae
Site group 29
Bryophytes
Site group 125
Lycophytes/Ferns
Site group 4
Gymnosperms
Site group 6
Basal angiosperms
Site group 13
Monocots
Site group 117
Eudicots
Current group 495
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Pathway Coverage
Terpenoid pathway 30.57% Alkaloid pathway 21.83% Phenylpropanoid pathway 18.84% Flavonoid pathway 14.27% Rosmarinic acid pathway 7.45% Steroid pathway 7.05%
Family Distribution
C4H 5.87% BAHD 5.87% C3'H/CYP98A 5.47% UGT 4.36% UFGT 4.02% 7DLGT 3.91% CYP76 3.83% T3O 3.49%
Other Families 63.17%
More Families (96)
IFS 154 3.28% POD 127 2.7% 4CL 123 2.62% F3'H/CYP75B 116 2.47% F3H 115 2.45% CAD 109 2.32% BR6OX2/CYP85A2 94 2.0% DWF4/CYP90B1 89 1.89% CODM/T6ODM 88 1.87% NMT 82 1.74% CAS 79 1.68% TPS 77 1.64% CYP71 72 1.53% SMT1/SMT2/SMT3 70 1.49% GES 63 1.34% STR 63 1.34% H6H 60 1.28% TRI/TRII 55 1.17% LAC 55 1.17% CSE 54 1.15% F5H/CYP84A 52 1.11% HCT 52 1.11% COMT 51 1.09% G8O/G8H 49 1.04% T16H 43 0.91% CYP90D1 43 0.91% IFR 40 0.85% RAS 38 0.81% PYKS 37 0.79% GS 36 0.77% PMT 35 0.74% F3'5'H/CYP75A 34 0.72% TAT 33 0.7% CYP51G1 32 0.68% SGD 31 0.66% ANR 31 0.66% IO 30 0.64% BR6OX1/CYP85A1 30 0.64% FNS 29 0.62% ANS/LDOX 27 0.57% 7DLH 25 0.53% DFR 23 0.49% 16OMT 22 0.47% SLS 21 0.45% PAL 21 0.45% CCR 19 0.4% CPD/CYP90A1 18 0.38% BBE 17 0.36% 8HGO 17 0.36% CHS 17 0.36% COR 16 0.34% LAMT 13 0.28% NCS 12 0.26% CNMT 12 0.26% SMO1/SMO2 12 0.26% ROT3/CYP90C1 11 0.23% CYP80B1 10 0.21% DXS 10 0.21% TDC 9 0.19% ISY 9 0.19% AACT 9 0.19% FPPS 9 0.19% MDS/IspF 9 0.19% MPO 8 0.17% CHI 8 0.17% CCoAOMT 8 0.17% GGPPS 8 0.17% CPR 7 0.15% SQE 7 0.15% MVK 6 0.13% CYP719 5 0.11% HPPR 5 0.11% CPI1 5 0.11% SQS/FDFT1 5 0.11% IDI 5 0.11% 6OMT_4OMT_SOMT 4 0.09% DET2 4 0.09% DWF1 4 0.09% MVD 4 0.09% HDR/IspH 4 0.09% XMT_MXMT_DXMT 3 0.06% DWF7 3 0.06% MCT/IspD 3 0.06% PMK 3 0.06% GPPS 3 0.06% HMGS 3 0.06% TYDC_DDC 2 0.04% FLS 2 0.04% HYD1 2 0.04% CMK/IspE 2 0.04% HDS/IspG 2 0.04% ODC 1 0.02% ADC 1 0.02% CYP80F1 1 0.02% HMGR 1 0.02% DXR 1 0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 542 18 BAHD (202) View species results
Alkaloid pathway 387 23 7DLGT (90) View species results
Phenylpropanoid pathway 334 11 POD (112) View species results
Flavonoid pathway 253 9 UFGT (172) View species results
Rosmarinic acid pathway 132 7 C4H (57) View species results
Steroid pathway 125 9 CAS (56) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1806 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 366 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: STR
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Protein/Isoform Record Pathway Family Confidence Status Best Target
Mpudscaffold6164_cov2200271080 Alkaloid STR low borderline STR__00002__sp_P68175_STSY_RAUSE
Mpudscaffold6209_cov2160272860 Alkaloid STR low borderline STR__00002__sp_P68175_STSY_RAUSE
Mpudscaffold6209_cov2160272890 Alkaloid STR medium pass STR__00003__sp_Q9M1B4_SSL13_ARATH
Mpudscaffold6595_cov1900281290 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
Mpudscaffold66_cov2170284150 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
Mpudscaffold678_cov2160286070 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
Mpudscaffold7229_cov1870291910 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
Mpudscaffold7787_cov2180299670 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
Mpudscaffold7939_cov2330302660 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
Mpudscaffold8656_cov2270310910 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
Mpudscaffold8919_cov2180315560 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
Mpudscaffold928_cov2150321840 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
Mpudscaffold9569_cov1800325500 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR