Miscanthus lutarioriparius (miscanthus_lutarioriparius)
Imported from atlas release summary for Miscanthus lutarioriparius.
3703
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
3703
Candidate Genes
C4H
6.31%
C3'H/CYP98A
6.02%
UGT
5.32%
BAHD
4.83%
7DLGT
4.8%
UFGT
4.61%
CYP76
3.88%
4CL
3.82%
Other Families
60.41%
More Families (98)
T3O
345
3.76%
IFS
321
3.5%
POD
293
3.19%
F3'H/CYP75B
225
2.45%
DWF4/CYP90B1
203
2.21%
BR6OX2/CYP85A2
198
2.16%
F3H
177
1.93%
NMT
174
1.9%
CYP71
150
1.63%
STR
146
1.59%
SMT1/SMT2/SMT3
142
1.55%
PYKS
122
1.33%
CAD
106
1.15%
TRI/TRII
91
0.99%
CCR
89
0.97%
H6H
88
0.96%
SLS
86
0.94%
CSE
85
0.93%
G8O/G8H
84
0.92%
LAC
84
0.92%
ANR
83
0.9%
CAS
83
0.9%
CODM/T6ODM
82
0.89%
PAL
78
0.85%
TPS
76
0.83%
IFR
75
0.82%
COMT
75
0.82%
RAS
75
0.82%
F5H/CYP84A
73
0.8%
SGD
72
0.78%
PMT
70
0.76%
T16H
68
0.74%
CYP90D1
68
0.74%
CYP51G1
68
0.74%
FNS
66
0.72%
GES
65
0.71%
16OMT
64
0.7%
NCS
63
0.69%
HCT
61
0.66%
CHS
59
0.64%
IO
51
0.56%
GS
49
0.53%
F3'5'H/CYP75A
46
0.5%
BR6OX1/CYP85A1
45
0.49%
DFR
44
0.48%
COR
39
0.42%
BBE
38
0.41%
CPD/CYP90A1
37
0.4%
TYDC_DDC
36
0.39%
TAT
33
0.36%
ANS/LDOX
26
0.28%
HPPR
26
0.28%
8HGO
24
0.26%
CNMT
22
0.24%
MVK
22
0.24%
AACT
22
0.24%
FPPS
20
0.22%
CYP719
18
0.2%
CPR
17
0.19%
LAMT
16
0.17%
TDC
16
0.17%
SQS/FDFT1
16
0.17%
CCoAOMT
15
0.16%
CYP80B1
14
0.15%
GGPPS
14
0.15%
7DLH
13
0.14%
ROT3/CYP90C1
12
0.13%
CYP80F1
11
0.12%
SMO1/SMO2
11
0.12%
XMT_MXMT_DXMT
10
0.11%
ISY
9
0.1%
6OMT_4OMT_SOMT
9
0.1%
MPO
9
0.1%
DWF1
9
0.1%
ODC
8
0.09%
DET2
8
0.09%
HMGS
8
0.09%
DXS
8
0.09%
MVD
7
0.08%
ADC
6
0.07%
HYD1
6
0.07%
IDI
6
0.07%
HDS/IspG
6
0.07%
HMGR
6
0.07%
CHI
5
0.05%
MCT/IspD
5
0.05%
FLS
4
0.04%
SQE
4
0.04%
CPI1
4
0.04%
CMK/IspE
4
0.04%
PMK
3
0.03%
HDR/IspH
3
0.03%
FK
2
0.02%
DWF7
2
0.02%
DWF5
2
0.02%
DXR
2
0.02%
MDS/IspF
2
0.02%
GPPS
2
0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 1063 | 21 | UGT (450) | View species results |
| Alkaloid pathway | 820 | 27 | 7DLGT (211) | View species results |
| Phenylpropanoid pathway | 668 | 12 | POD (243) | View species results |
| Flavonoid pathway | 608 | 13 | UFGT (392) | View species results |
| Rosmarinic acid pathway | 357 | 7 | C4H (152) | View species results |
| Steroid pathway | 187 | 13 | SMT1/SMT2/SMT3 (68) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 3624 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 579 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: 4CL
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| Mluta03G0042270.1 | Phenylpropanoid | 4CL | medium | pass | 4CL__00013__sp_Q84P23_4CLL9_ARATH |
| Mluta03G0042810.1 | Phenylpropanoid | 4CL | low | borderline | 4CL__00012__sp_Q84P21_4CLL5_ARATH |
| Mluta04G0025050.1 | Phenylpropanoid | 4CL | medium | pass | 4CL__00013__sp_Q84P23_4CLL9_ARATH |
| Mluta04G0036910.1 | Phenylpropanoid | 4CL | medium | pass | 4CL__00013__sp_Q84P23_4CLL9_ARATH |
| Mluta05G0014570.1 | Phenylpropanoid | 4CL | low | borderline | 4CL__00018__sp_Q9S777_4CL3_ARATH |
| Mluta05G0018780.1 | Phenylpropanoid | 4CL | low | borderline | 4CL__00006__sp_P17814_4CL1_ORYSJ |
| Mluta05G0020320.1 | Phenylpropanoid | 4CL | low | borderline | 4CL__00014__sp_Q84P24_4CLL6_ARATH |
| Mluta05G0041960.1 | Phenylpropanoid | 4CL | medium | pass | 4CL__00011__sp_Q6ZAC1_4CL5_ORYSJ |
| Mluta06G0007560.1 | Phenylpropanoid | 4CL | medium | pass | 4CL__00013__sp_Q84P23_4CLL9_ARATH |
| Mluta06G0007600.1 | Phenylpropanoid | 4CL | medium | pass | 4CL__00013__sp_Q84P23_4CLL9_ARATH |
| Mluta06G0014900.1 | Phenylpropanoid | 4CL | low | borderline | 4CL__00018__sp_Q9S777_4CL3_ARATH |
| Mluta06G0019270.1 | Phenylpropanoid | 4CL | medium | pass | 4CL__00006__sp_P17814_4CL1_ORYSJ |
| Mluta06G0020700.1 | Phenylpropanoid | 4CL | low | borderline | 4CL__00014__sp_Q84P24_4CLL6_ARATH |
| Mluta06G0037880.1 | Phenylpropanoid | 4CL | medium | pass | 4CL__00001__sp_I3PB36_CNL_PETHY |
| Mluta06G0042060.1 | Phenylpropanoid | 4CL | medium | pass | 4CL__00011__sp_Q6ZAC1_4CL5_ORYSJ |
| Mluta07G0009680.1 | Phenylpropanoid | 4CL | medium | pass | 4CL__00008__sp_Q42982_4CL2_ORYSJ |
| Mluta07G0009700.1 | Phenylpropanoid | 4CL | medium | pass | 4CL__00008__sp_Q42982_4CL2_ORYSJ |
| Mluta07G0024210.1 | Phenylpropanoid | 4CL | medium | pass | 4CL__00011__sp_Q6ZAC1_4CL5_ORYSJ |
| Mluta07G0035510.1 | Phenylpropanoid | 4CL | low | borderline | 4CL__00003__sp_M4ISH0_CCL1_HUMLU |
| Mluta07G0041170.1 | Phenylpropanoid | 4CL | medium | pass | 4CL__00006__sp_P17814_4CL1_ORYSJ |
| Mluta07G0048020.1 | Phenylpropanoid | 4CL | medium | pass | 4CL__00010__sp_Q6ETN3_4CL3_ORYSJ |
| Mluta07G0052260.1 | Phenylpropanoid | 4CL | medium | pass | 4CL__00001__sp_I3PB36_CNL_PETHY |
| Mluta07G0052650.1 | Phenylpropanoid | 4CL | medium | pass | 4CL__00001__sp_I3PB36_CNL_PETHY |
| Mluta08G0009780.1 | Phenylpropanoid | 4CL | medium | pass | 4CL__00008__sp_Q42982_4CL2_ORYSJ |
| Mluta08G0019550.1 | Phenylpropanoid | 4CL | low | borderline | 4CL__00005__sp_P0C5B6_4CLL4_ARATH |
| Mluta08G0019620.1 | Phenylpropanoid | 4CL | low | borderline | 4CL__00005__sp_P0C5B6_4CLL4_ARATH |
| Mluta08G0027430.1 | Phenylpropanoid | 4CL | medium | pass | 4CL__00010__sp_Q6ETN3_4CL3_ORYSJ |
| Mluta08G0031920.1 | Phenylpropanoid | 4CL | medium | pass | 4CL__00001__sp_I3PB36_CNL_PETHY |
| Mluta09G0011460.1 | Phenylpropanoid | 4CL | low | borderline | 4CL__00006__sp_P17814_4CL1_ORYSJ |
| Mluta09G0021880.1 | Phenylpropanoid | 4CL | low | borderline | 4CL__00014__sp_Q84P24_4CLL6_ARATH |
| Mluta09G0022770.1 | Phenylpropanoid | 4CL | low | borderline | 4CL__00014__sp_Q84P24_4CLL6_ARATH |
| Mluta09G0023570.1 | Phenylpropanoid | 4CL | medium | pass | 4CL__00005__sp_P0C5B6_4CLL4_ARATH |
| Mluta09G0024290.1 | Phenylpropanoid | 4CL | low | borderline | 4CL__00015__sp_Q9LU36_4CL4_ARATH |
| Mluta09G0024570.1 | Phenylpropanoid | 4CL | low | borderline | 4CL__00007__sp_Q42524_4CL1_ARATH |
| Mluta09G0026080.1 | Phenylpropanoid | 4CL | low | borderline | 4CL__00012__sp_Q84P21_4CLL5_ARATH |
| Mluta10G0012790.1 | Phenylpropanoid | 4CL | low | borderline | 4CL__00015__sp_Q9LU36_4CL4_ARATH |
| Mluta10G0012930.1 | Phenylpropanoid | 4CL | low | borderline | 4CL__00015__sp_Q9LU36_4CL4_ARATH |
| Mluta10G0025690.1 | Phenylpropanoid | 4CL | low | borderline | 4CL__00014__sp_Q84P24_4CLL6_ARATH |
| Mluta10G0025810.1 | Phenylpropanoid | 4CL | low | borderline | 4CL__00014__sp_Q84P24_4CLL6_ARATH |
| Mluta10G0029040.1 | Phenylpropanoid | 4CL | low | borderline | 4CL__00015__sp_Q9LU36_4CL4_ARATH |
| Mluta10G0030980.1 | Phenylpropanoid | 4CL | low | borderline | 4CL__00014__sp_Q84P24_4CLL6_ARATH |
| Mluta10G0031180.1 | Phenylpropanoid | 4CL | low | borderline | 4CL__00016__sp_Q9M0X9_4CLL7_ARATH |
| Mluta11G0001030.1 | Phenylpropanoid | 4CL | medium | pass | 4CL__00019__sp_Q9SMT7_4CLLA_ARATH |
| Mluta11G0001880.1 | Phenylpropanoid | 4CL | medium | pass | 4CL__00001__sp_I3PB36_CNL_PETHY |
| Mluta12G0001440.1 | Phenylpropanoid | 4CL | medium | pass | 4CL__00019__sp_Q9SMT7_4CLLA_ARATH |
| Mluta12G0002150.1 | Phenylpropanoid | 4CL | medium | pass | 4CL__00001__sp_I3PB36_CNL_PETHY |
| Mluta12G0002400.1 | Phenylpropanoid | 4CL | medium | pass | 4CL__00001__sp_I3PB36_CNL_PETHY |
| Mluta12G0020860.1 | Phenylpropanoid | 4CL | medium | pass | 4CL__00004__sp_O24146_4CL2_TOBAC |
| Mluta12G0021020.1 | Phenylpropanoid | 4CL | medium | pass | 4CL__00004__sp_O24146_4CL2_TOBAC |
| Mluta12G0022460.1 | Phenylpropanoid | 4CL | low | borderline | 4CL__00005__sp_P0C5B6_4CLL4_ARATH |