Miscanthus lutarioriparius (miscanthus_lutarioriparius)
Imported from atlas release summary for Miscanthus lutarioriparius.
3703
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
3703
Candidate Genes
C4H
6.31%
C3'H/CYP98A
6.02%
UGT
5.32%
BAHD
4.83%
7DLGT
4.8%
UFGT
4.61%
CYP76
3.88%
4CL
3.82%
Other Families
60.41%
More Families (98)
T3O
345
3.76%
IFS
321
3.5%
POD
293
3.19%
F3'H/CYP75B
225
2.45%
DWF4/CYP90B1
203
2.21%
BR6OX2/CYP85A2
198
2.16%
F3H
177
1.93%
NMT
174
1.9%
CYP71
150
1.63%
STR
146
1.59%
SMT1/SMT2/SMT3
142
1.55%
PYKS
122
1.33%
CAD
106
1.15%
TRI/TRII
91
0.99%
CCR
89
0.97%
H6H
88
0.96%
SLS
86
0.94%
CSE
85
0.93%
G8O/G8H
84
0.92%
LAC
84
0.92%
ANR
83
0.9%
CAS
83
0.9%
CODM/T6ODM
82
0.89%
PAL
78
0.85%
TPS
76
0.83%
IFR
75
0.82%
COMT
75
0.82%
RAS
75
0.82%
F5H/CYP84A
73
0.8%
SGD
72
0.78%
PMT
70
0.76%
T16H
68
0.74%
CYP90D1
68
0.74%
CYP51G1
68
0.74%
FNS
66
0.72%
GES
65
0.71%
16OMT
64
0.7%
NCS
63
0.69%
HCT
61
0.66%
CHS
59
0.64%
IO
51
0.56%
GS
49
0.53%
F3'5'H/CYP75A
46
0.5%
BR6OX1/CYP85A1
45
0.49%
DFR
44
0.48%
COR
39
0.42%
BBE
38
0.41%
CPD/CYP90A1
37
0.4%
TYDC_DDC
36
0.39%
TAT
33
0.36%
ANS/LDOX
26
0.28%
HPPR
26
0.28%
8HGO
24
0.26%
CNMT
22
0.24%
MVK
22
0.24%
AACT
22
0.24%
FPPS
20
0.22%
CYP719
18
0.2%
CPR
17
0.19%
LAMT
16
0.17%
TDC
16
0.17%
SQS/FDFT1
16
0.17%
CCoAOMT
15
0.16%
CYP80B1
14
0.15%
GGPPS
14
0.15%
7DLH
13
0.14%
ROT3/CYP90C1
12
0.13%
CYP80F1
11
0.12%
SMO1/SMO2
11
0.12%
XMT_MXMT_DXMT
10
0.11%
ISY
9
0.1%
6OMT_4OMT_SOMT
9
0.1%
MPO
9
0.1%
DWF1
9
0.1%
ODC
8
0.09%
DET2
8
0.09%
HMGS
8
0.09%
DXS
8
0.09%
MVD
7
0.08%
ADC
6
0.07%
HYD1
6
0.07%
IDI
6
0.07%
HDS/IspG
6
0.07%
HMGR
6
0.07%
CHI
5
0.05%
MCT/IspD
5
0.05%
FLS
4
0.04%
SQE
4
0.04%
CPI1
4
0.04%
CMK/IspE
4
0.04%
PMK
3
0.03%
HDR/IspH
3
0.03%
FK
2
0.02%
DWF7
2
0.02%
DWF5
2
0.02%
DXR
2
0.02%
MDS/IspF
2
0.02%
GPPS
2
0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 1063 | 21 | UGT (450) | View species results |
| Alkaloid pathway | 820 | 27 | 7DLGT (211) | View species results |
| Phenylpropanoid pathway | 668 | 12 | POD (243) | View species results |
| Flavonoid pathway | 608 | 13 | UFGT (392) | View species results |
| Rosmarinic acid pathway | 357 | 7 | C4H (152) | View species results |
| Steroid pathway | 187 | 13 | SMT1/SMT2/SMT3 (68) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 3624 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 579 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: NMT
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| Mluta05G0018030.1 | Alkaloid | NMT | medium | borderline | NMT__00015__sp_C8YTM5_PEAM2_WHEAT |
| Mluta05G0020350.1 | Alkaloid | NMT | low | borderline | NMT__00024__sp_P0CB22_ATX2_ARATH |
| Mluta05G0025450.1 | Alkaloid | NMT | low | borderline | NMT__00056__sp_Q9FNE9_ATXR6_ARATH |
| Mluta05G0032470.1 | Alkaloid | NMT | medium | borderline | NMT__00052__sp_Q9AVJ9_MXMT1_COFAR |
| Mluta05G0039340.1 | Alkaloid | NMT | low | borderline | NMT__00024__sp_P0CB22_ATX2_ARATH |
| Mluta06G0000980.1 | Alkaloid | NMT | medium | pass | NMT__00047__sp_Q8VZJ1_ATXR5_ARATH |
| Mluta06G0004490.1 | Alkaloid | NMT | low | borderline | NMT__00042__sp_Q8GZB6_SUVH4_ARATH |
| Mluta06G0004740.1 | Alkaloid | NMT | medium | pass | NMT__00042__sp_Q8GZB6_SUVH4_ARATH |
| Mluta06G0004760.1 | Alkaloid | NMT | low | borderline | NMT__00049__sp_Q93YF5_SUVH1_TOBAC |
| Mluta06G0012250.1 | Alkaloid | NMT | medium | pass | NMT__00049__sp_Q93YF5_SUVH1_TOBAC |
| Mluta06G0012650.1 | Alkaloid | NMT | medium | borderline | NMT__00005__sp_A0A6C0WW36_CKTCS_CAMSB |
| Mluta06G0013940.1 | Alkaloid | NMT | medium | pass | NMT__00054__sp_Q9FF80_SUVH1_ARATH |
| Mluta06G0018610.1 | Alkaloid | NMT | medium | borderline | NMT__00015__sp_C8YTM5_PEAM2_WHEAT |
| Mluta06G0018620.1 | Alkaloid | NMT | medium | borderline | NMT__00015__sp_C8YTM5_PEAM2_WHEAT |
| Mluta06G0020730.1 | Alkaloid | NMT | medium | pass | NMT__00024__sp_P0CB22_ATX2_ARATH |
| Mluta06G0025210.1 | Alkaloid | NMT | low | borderline | NMT__00056__sp_Q9FNE9_ATXR6_ARATH |
| Mluta06G0038010.1 | Alkaloid | NMT | low | borderline | NMT__00035__sp_Q6K431_TRX1_ORYSJ |
| Mluta06G0040280.1 | Alkaloid | NMT | low | borderline | NMT__00035__sp_Q6K431_TRX1_ORYSJ |
| Mluta06G0040970.1 | Alkaloid | NMT | low | borderline | NMT__00035__sp_Q6K431_TRX1_ORYSJ |
| Mluta07G0000890.1 | Alkaloid | NMT | medium | pass | NMT__00036__sp_Q6K9X3_NAMT1_ORYSJ |
| Mluta07G0001420.1 | Alkaloid | NMT | low | borderline | NMT__00016__sp_F4JNX3_CMKMT_ARATH |
| Mluta07G0004960.1 | Alkaloid | NMT | low | borderline | NMT__00035__sp_Q6K431_TRX1_ORYSJ |
| Mluta07G0008870.1 | Alkaloid | NMT | medium | pass | NMT__00021__sp_O64827_SUVR5_ARATH |
| Mluta07G0009270.1 | Alkaloid | NMT | medium | borderline | NMT__00002__sp_A0A075D6M1_NNMT_RAUSE |
| Mluta07G0011870.1 | Alkaloid | NMT | medium | pass | NMT__00046__sp_Q8VZ17_SUVH6_ARATH |
| Mluta07G0012060.1 | Alkaloid | NMT | medium | pass | NMT__00046__sp_Q8VZ17_SUVH6_ARATH |
| Mluta07G0013680.1 | Alkaloid | NMT | low | borderline | NMT__00048__sp_Q8W595_SUVR4_ARATH |
| Mluta07G0013860.1 | Alkaloid | NMT | low | borderline | NMT__00028__sp_Q2LAE1_ASHH2_ARATH |
| Mluta07G0013870.1 | Alkaloid | NMT | low | borderline | NMT__00028__sp_Q2LAE1_ASHH2_ARATH |
| Mluta07G0013920.1 | Alkaloid | NMT | medium | pass | NMT__00061__sp_Q9SAH5_PLMT_ARATH |
| Mluta07G0017130.1 | Alkaloid | NMT | low | borderline | NMT__00028__sp_Q2LAE1_ASHH2_ARATH |
| Mluta07G0022100.1 | Alkaloid | NMT | medium | pass | NMT__00046__sp_Q8VZ17_SUVH6_ARATH |
| Mluta07G0022110.1 | Alkaloid | NMT | low | borderline | NMT__00046__sp_Q8VZ17_SUVH6_ARATH |
| Mluta07G0022130.1 | Alkaloid | NMT | low | borderline | NMT__00046__sp_Q8VZ17_SUVH6_ARATH |
| Mluta07G0022140.1 | Alkaloid | NMT | low | borderline | NMT__00046__sp_Q8VZ17_SUVH6_ARATH |
| Mluta07G0024050.1 | Alkaloid | NMT | medium | pass | NMT__00028__sp_Q2LAE1_ASHH2_ARATH |
| Mluta07G0026010.1 | Alkaloid | NMT | low | borderline | NMT__00048__sp_Q8W595_SUVR4_ARATH |
| Mluta07G0026090.1 | Alkaloid | NMT | medium | pass | NMT__00067__sp_Q9T0G7_SUVH9_ARATH |
| Mluta07G0031970.1 | Alkaloid | NMT | low | borderline | NMT__00052__sp_Q9AVJ9_MXMT1_COFAR |
| Mluta07G0038790.1 | Alkaloid | NMT | medium | pass | NMT__00020__sp_O23372_ATXR3_ARATH |
| Mluta07G0050360.1 | Alkaloid | NMT | medium | pass | NMT__00041__sp_Q8GWT4_ANM15_ARATH |
| Mluta07G0050410.1 | Alkaloid | NMT | medium | borderline | NMT__00007__sp_A0A6C0WX00_CKTBS_CAMSB |
| Mluta07G0051810.1 | Alkaloid | NMT | medium | pass | NMT__00056__sp_Q9FNE9_ATXR6_ARATH |
| Mluta07G0052100.1 | Alkaloid | NMT | medium | pass | NMT__00056__sp_Q9FNE9_ATXR6_ARATH |
| Mluta07G0052110.1 | Alkaloid | NMT | low | borderline | NMT__00016__sp_F4JNX3_CMKMT_ARATH |
| Mluta07G0052490.1 | Alkaloid | NMT | low | borderline | NMT__00016__sp_F4JNX3_CMKMT_ARATH |
| Mluta07G0052520.1 | Alkaloid | NMT | low | borderline | NMT__00016__sp_F4JNX3_CMKMT_ARATH |
| Mluta07G0052930.1 | Alkaloid | NMT | low | borderline | NMT__00016__sp_F4JNX3_CMKMT_ARATH |
| Mluta07G0053790.1 | Alkaloid | NMT | medium | borderline | NMT__00029__sp_Q42963_PMT1_TOBAC |
| Mluta08G0001150.1 | Alkaloid | NMT | medium | borderline | NMT__00036__sp_Q6K9X3_NAMT1_ORYSJ |