Miscanthus lutarioriparius (miscanthus_lutarioriparius)
Imported from atlas release summary for Miscanthus lutarioriparius.
3703
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
3703
Candidate Genes
C4H
6.31%
C3'H/CYP98A
6.02%
UGT
5.32%
BAHD
4.83%
7DLGT
4.8%
UFGT
4.61%
CYP76
3.88%
4CL
3.82%
Other Families
60.41%
More Families (98)
T3O
345
3.76%
IFS
321
3.5%
POD
293
3.19%
F3'H/CYP75B
225
2.45%
DWF4/CYP90B1
203
2.21%
BR6OX2/CYP85A2
198
2.16%
F3H
177
1.93%
NMT
174
1.9%
CYP71
150
1.63%
STR
146
1.59%
SMT1/SMT2/SMT3
142
1.55%
PYKS
122
1.33%
CAD
106
1.15%
TRI/TRII
91
0.99%
CCR
89
0.97%
H6H
88
0.96%
SLS
86
0.94%
CSE
85
0.93%
G8O/G8H
84
0.92%
LAC
84
0.92%
ANR
83
0.9%
CAS
83
0.9%
CODM/T6ODM
82
0.89%
PAL
78
0.85%
TPS
76
0.83%
IFR
75
0.82%
COMT
75
0.82%
RAS
75
0.82%
F5H/CYP84A
73
0.8%
SGD
72
0.78%
PMT
70
0.76%
T16H
68
0.74%
CYP90D1
68
0.74%
CYP51G1
68
0.74%
FNS
66
0.72%
GES
65
0.71%
16OMT
64
0.7%
NCS
63
0.69%
HCT
61
0.66%
CHS
59
0.64%
IO
51
0.56%
GS
49
0.53%
F3'5'H/CYP75A
46
0.5%
BR6OX1/CYP85A1
45
0.49%
DFR
44
0.48%
COR
39
0.42%
BBE
38
0.41%
CPD/CYP90A1
37
0.4%
TYDC_DDC
36
0.39%
TAT
33
0.36%
ANS/LDOX
26
0.28%
HPPR
26
0.28%
8HGO
24
0.26%
CNMT
22
0.24%
MVK
22
0.24%
AACT
22
0.24%
FPPS
20
0.22%
CYP719
18
0.2%
CPR
17
0.19%
LAMT
16
0.17%
TDC
16
0.17%
SQS/FDFT1
16
0.17%
CCoAOMT
15
0.16%
CYP80B1
14
0.15%
GGPPS
14
0.15%
7DLH
13
0.14%
ROT3/CYP90C1
12
0.13%
CYP80F1
11
0.12%
SMO1/SMO2
11
0.12%
XMT_MXMT_DXMT
10
0.11%
ISY
9
0.1%
6OMT_4OMT_SOMT
9
0.1%
MPO
9
0.1%
DWF1
9
0.1%
ODC
8
0.09%
DET2
8
0.09%
HMGS
8
0.09%
DXS
8
0.09%
MVD
7
0.08%
ADC
6
0.07%
HYD1
6
0.07%
IDI
6
0.07%
HDS/IspG
6
0.07%
HMGR
6
0.07%
CHI
5
0.05%
MCT/IspD
5
0.05%
FLS
4
0.04%
SQE
4
0.04%
CPI1
4
0.04%
CMK/IspE
4
0.04%
PMK
3
0.03%
HDR/IspH
3
0.03%
FK
2
0.02%
DWF7
2
0.02%
DWF5
2
0.02%
DXR
2
0.02%
MDS/IspF
2
0.02%
GPPS
2
0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 1063 | 21 | UGT (450) | View species results |
| Alkaloid pathway | 820 | 27 | 7DLGT (211) | View species results |
| Phenylpropanoid pathway | 668 | 12 | POD (243) | View species results |
| Flavonoid pathway | 608 | 13 | UFGT (392) | View species results |
| Rosmarinic acid pathway | 357 | 7 | C4H (152) | View species results |
| Steroid pathway | 187 | 13 | SMT1/SMT2/SMT3 (68) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 3624 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 579 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: STR
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| Mluta13G0016620.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Mluta14G0002200.1 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| Mluta14G0002210.1 | Alkaloid | STR | low | borderline | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| Mluta14G0002540.1 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| Mluta14G0014220.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Mluta14G0019520.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Mluta14G0020420.1 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| Mluta14G0021180.1 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| Mluta14G0026740.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Mluta15G0016640.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Mluta16G0007910.1 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| Mluta16G0015850.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Mluta16G0022050.1 | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| Mluta16G0022060.1 | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| Mluta16G0022100.1 | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| Mluta16G0022150.1 | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| Mluta17G0008060.1 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| Mluta17G0008070.1 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| Mluta17G0008330.1 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| Mluta17G0013840.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Mluta17G0017050.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Mluta17G0022540.1 | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| Mluta17G0026500.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Mluta18G0007620.1 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| Mluta18G0008790.1 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| Mluta18G0009930.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Mluta18G0011230.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Mluta18G0011240.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Mluta18G0011630.1 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| Mluta18G0013510.1 | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| Mluta18G0013610.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Mluta18G0014740.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Mluta18G0018600.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Mluta18G0023680.1 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| Mluta19G0007370.1 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| Mluta19G0008290.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Mluta19G0009040.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Mluta19G0010720.1 | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| Mluta19G0010950.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| Mluta19G0012220.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| MlutaMl_utg00660002410.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| MlutaMl_utg03030011930.1 | Alkaloid | STR | low | borderline | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| MlutaMl_utg05590020650.1 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| MlutaMl_utg06960025920.1 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| MlutaMl_utg08020030470.1 | Alkaloid | STR | low | borderline | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| MlutaMl_utg08020030480.1 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |