PlantSME Plant secondary metabolism enzyme database

Miscanthus sinensis (miscanthus_sinensis)

Imported from atlas release summary for Miscanthus sinensis.

3871
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1110 21 BAHD (401) View species results
Alkaloid pathway 914 23 7DLGT (174) View species results
Phenylpropanoid pathway 782 12 POD (366) View species results
Flavonoid pathway 522 12 UFGT (337) View species results
Rosmarinic acid pathway 319 7 C4H (128) View species results
Steroid pathway 224 13 CAS (83) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 3406 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 702 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: GS
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Gene Pathway Family Confidence Status
Msin03G0017540.1 Alkaloid GS high pass
Msin03G0017540.2 Alkaloid GS high pass
Msin03G0017560.1 Alkaloid GS high pass
Msin03G0021800.1 Alkaloid GS low borderline
Msin04G0017980.1 Alkaloid GS high pass
Msin04G0023750.1 Alkaloid GS low borderline
Msin04G0023760.1 Alkaloid GS low borderline
Msin05G0026450.1 Alkaloid GS low borderline
Msin06G0026450.1 Alkaloid GS low borderline
Msin07G0006890.1 Alkaloid GS medium pass
Msin07G0013830.1 Alkaloid GS high pass
Msin07G0013830.2 Alkaloid GS high pass
Msin07G0020900.1 Alkaloid GS medium pass
Msin07G0025290.1 Alkaloid GS medium pass
Msin07G0032190.1 Alkaloid GS low borderline
Msin07G0053270.1 Alkaloid GS low borderline
Msin08G0006870.1 Alkaloid GS high pass
Msin08G0006900.1 Alkaloid GS medium pass
Msin08G0031680.1 Alkaloid GS low borderline
Msin11G0001390.1 Alkaloid GS high pass
Msin11G0003780.1 Alkaloid GS low borderline
Msin11G0013990.1 Alkaloid GS low borderline
Msin11G0020810.1 Alkaloid GS high pass
Msin11G0020810.2 Alkaloid GS high pass
Msin11G0020810.3 Alkaloid GS high pass
Msin11G0021880.1 Alkaloid GS low borderline
Msin12G0001220.1 Alkaloid GS medium pass
Msin12G0001230.1 Alkaloid GS medium pass
Msin12G0014640.1 Alkaloid GS low borderline
Msin12G0020890.1 Alkaloid GS high pass
Msin12G0023510.1 Alkaloid GS low borderline
Msin12G0023510.2 Alkaloid GS low borderline
Msin12G0023560.1 Alkaloid GS high pass
Msin12G0023560.2 Alkaloid GS high pass
Msin13G0000230.1 Alkaloid GS medium pass
Msin13G0005160.1 Alkaloid GS high pass
Msin13G0008840.1 Alkaloid GS low borderline
Msin14G0009230.1 Alkaloid GS high pass
Msin15G0011840.1 Alkaloid GS high pass
Msin18G0006080.1 Alkaloid GS high pass
Msin18G0006090.1 Alkaloid GS medium pass
Msin18G0006100.1 Alkaloid GS medium pass
Msin19G0007650.1 Alkaloid GS high pass
Msin19G0007660.1 Alkaloid GS high pass
Msinscaffold000830006910.1 Alkaloid GS low borderline
Msinscaffold004290022250.1 Alkaloid GS high pass
Msinscaffold004290022250.2 Alkaloid GS high pass
Msinscaffold005740026530.1 Alkaloid GS low borderline
Msinscaffold007940031800.1 Alkaloid GS medium pass
Msinscaffold017410046620.1 Alkaloid GS low borderline