PlantSME Plant secondary metabolism enzyme database

Miscanthus sinensis (miscanthus_sinensis)

Imported from atlas release summary for Miscanthus sinensis.

3871
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1110 21 BAHD (401) View species results
Alkaloid pathway 914 23 7DLGT (174) View species results
Phenylpropanoid pathway 782 12 POD (366) View species results
Flavonoid pathway 522 12 UFGT (337) View species results
Rosmarinic acid pathway 319 7 C4H (128) View species results
Steroid pathway 224 13 CAS (83) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 3406 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 702 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Rosmarinic acid pathway
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Gene Pathway Family Confidence Status
Msin16G0007620.1 Rosmarinic Acid 4CL medium pass
Msin17G0003560.1 Rosmarinic Acid 4CL medium pass
Msin18G0011770.1 Rosmarinic Acid 4CL medium pass
Msin18G0021340.1 Rosmarinic Acid 4CL medium pass
Msin18G0021340.2 Rosmarinic Acid 4CL medium pass
Msin19G0004690.1 Rosmarinic Acid 4CL low borderline
Msin19G0013050.1 Rosmarinic Acid 4CL medium pass
Msin19G0013060.1 Rosmarinic Acid 4CL medium pass
Msin19G0019340.1 Rosmarinic Acid 4CL medium pass
Msinscaffold001040008530.1 Rosmarinic Acid 4CL low borderline
Msinscaffold002490015360.1 Rosmarinic Acid 4CL low borderline
Msinscaffold004440022740.1 Rosmarinic Acid 4CL medium pass
Msinscaffold006090027540.1 Rosmarinic Acid 4CL low borderline
Msinscaffold006090027540.2 Rosmarinic Acid 4CL low borderline
Msinscaffold006090027540.3 Rosmarinic Acid 4CL low borderline
Msinscaffold006090027540.4 Rosmarinic Acid 4CL low borderline
Msinscaffold035200056290.1 Rosmarinic Acid 4CL medium pass
Msin01G0000600.1 Rosmarinic Acid C4H medium pass
Msin01G0001510.1 Rosmarinic Acid C4H low borderline
Msin01G0006490.1 Rosmarinic Acid C4H low borderline
Msin01G0006500.1 Rosmarinic Acid C4H medium pass
Msin01G0006520.1 Rosmarinic Acid C4H medium pass
Msin01G0006530.1 Rosmarinic Acid C4H low borderline
Msin01G0011890.1 Rosmarinic Acid C4H medium pass
Msin01G0012630.1 Rosmarinic Acid C4H low borderline
Msin01G0015820.1 Rosmarinic Acid C4H low borderline
Msin01G0015830.1 Rosmarinic Acid C4H low borderline
Msin01G0015850.1 Rosmarinic Acid C4H low borderline
Msin01G0016640.1 Rosmarinic Acid C4H low borderline
Msin01G0016980.1 Rosmarinic Acid C4H low borderline
Msin01G0017360.1 Rosmarinic Acid C4H low borderline
Msin01G0017470.1 Rosmarinic Acid C4H medium pass
Msin01G0017480.1 Rosmarinic Acid C4H medium pass
Msin01G0017500.1 Rosmarinic Acid C4H medium pass
Msin01G0017810.1 Rosmarinic Acid C4H low borderline
Msin01G0017920.1 Rosmarinic Acid C4H medium pass
Msin01G0021210.1 Rosmarinic Acid C4H low borderline
Msin01G0023090.1 Rosmarinic Acid C4H medium pass
Msin01G0025230.1 Rosmarinic Acid C4H low borderline
Msin01G0030150.1 Rosmarinic Acid C4H low borderline
Msin01G0030150.2 Rosmarinic Acid C4H low borderline
Msin01G0030860.1 Rosmarinic Acid C4H medium pass
Msin01G0031390.1 Rosmarinic Acid C4H low borderline
Msin01G0031880.1 Rosmarinic Acid C4H medium pass
Msin01G0032190.1 Rosmarinic Acid C4H low borderline
Msin01G0032870.1 Rosmarinic Acid C4H low borderline
Msin01G0034030.1 Rosmarinic Acid C4H low borderline
Msin01G0034040.1 Rosmarinic Acid C4H low borderline
Msin01G0034220.1 Rosmarinic Acid C4H low borderline
Msin01G0034330.1 Rosmarinic Acid C4H low borderline