PlantSME Plant secondary metabolism enzyme database

Mnium hornum (mnium_hornum)

Imported from atlas release summary for Mnium hornum.

809
Candidate Genes
102
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Algae
Site group 29
Bryophytes
Current group 125
Lycophytes/Ferns
Site group 4
Gymnosperms
Site group 6
Basal angiosperms
Site group 13
Monocots
Site group 117
Eudicots
Site group 495
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
Phenylpropanoid pathway 24.72% Terpenoid pathway 24.72% Alkaloid pathway 22.25% Flavonoid pathway 14.22% Rosmarinic acid pathway 8.9% Steroid pathway 5.19%
Family Distribution
C4H 6.87% C3'H/CYP98A 5.83% BAHD 5.43% POD 5.13% CYP76 4.38% 4CL 4.03% NMT 3.49% IFS 2.99%
Other Families 61.85%
More Families (94)
PAL 51 2.54% 7DLGT 49 2.44% UGT 49 2.44% UFGT 47 2.34% T3O 46 2.29% STR 46 2.29% PYKS 44 2.19% F3H 44 2.19% DWF4/CYP90B1 43 2.14% BR6OX2/CYP85A2 41 2.04% F3'H/CYP75B 37 1.84% GS 34 1.69% IFR 34 1.69% CHS 32 1.59% T16H 27 1.34% CODM/T6ODM 25 1.25% CAD 25 1.25% CYP71 25 1.25% IO 24 1.2% F3'5'H/CYP75A 23 1.15% COMT 23 1.15% G8O/G8H 21 1.05% H6H 20 1.0% SMT1/SMT2/SMT3 19 0.95% LAC 17 0.85% 16OMT 16 0.8% TRI/TRII 16 0.8% SLS 15 0.75% NCS 15 0.75% CSE 14 0.7% CNMT 13 0.65% HCT 13 0.65% CAS 13 0.65% CCR 12 0.6% CYP90D1 12 0.6% 7DLH 11 0.55% FNS 11 0.55% CPD/CYP90A1 11 0.55% ANR 10 0.5% RAS 9 0.45% DWF5 9 0.45% LAMT 8 0.4% SGD 8 0.4% ROT3/CYP90C1 8 0.4% BBE 7 0.35% ANS/LDOX 7 0.35% DFR 7 0.35% CPR 7 0.35% 8HGO 6 0.3% MPO 6 0.3% BR6OX1/CYP85A1 6 0.3% DET2 6 0.3% AACT 6 0.3% GGPPS 6 0.3% PMT 5 0.25% TYDC_DDC 5 0.25% CYP80B1 5 0.25% COR 5 0.25% DXS 5 0.25% F5H/CYP84A 4 0.2% TAT 4 0.2% SQS/FDFT1 4 0.2% FPPS 4 0.2% HMGR 4 0.2% TPS 4 0.2% ISY 3 0.15% TDC 3 0.15% GES 3 0.15% ADC 3 0.15% CHI 3 0.15% HYD1 3 0.15% SQE 3 0.15% MVD 3 0.15% HDS/IspG 3 0.15% MVK 3 0.15% 6OMT_4OMT_SOMT 2 0.1% CYP719 2 0.1% FLS 2 0.1% CCoAOMT 2 0.1% SMO1/SMO2 2 0.1% FK 2 0.1% CMK/IspE 2 0.1% DXR 2 0.1% MCT/IspD 2 0.1% IDI 2 0.1% HPPR 1 0.05% CPI1 1 0.05% CYP51G1 1 0.05% DWF1 1 0.05% DWF7 1 0.05% MDS/IspF 1 0.05% HDR/IspH 1 0.05% PMK 1 0.05% HMGS 1 0.05%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 200 12 POD (98) View species results
Terpenoid pathway 200 20 BAHD (75) View species results
Alkaloid pathway 180 17 NMT (36) View species results
Flavonoid pathway 115 12 UFGT (43) View species results
Rosmarinic acid pathway 72 7 C4H (33) View species results
Steroid pathway 42 12 CAS (13) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 765 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 131 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
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Gene Pathway Family Confidence Status Best Target
Mhor2648900133540 Alkaloid ADC low borderline ADC__00001__sp_A0A1S3WYR7_ADC1B_TOBAC
Mhor2691990233280 Alkaloid ADC medium pass ADC__00004__sp_Q9SI64_SPE1_ARATH
Mhor2718500314330 Alkaloid ADC medium pass ADC__00003__sp_O23141_SPE2_ARATH