Musa beccarii (musa_beccarii)
/
Imported from atlas release summary for Musa beccarii.
1356
Candidate Genes
102
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Common name
/
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
1356
Candidate Genes
BAHD
6.62%
C3'H/CYP98A
5.91%
POD
5.27%
C4H
5.12%
4CL
4.94%
IFS
3.66%
CYP76
3.35%
UGT
3.08%
Other Families
62.04%
More Families (94)
T3O
97
2.96%
7DLGT
89
2.71%
UFGT
88
2.68%
F3H
80
2.44%
NMT
75
2.29%
DWF4/CYP90B1
72
2.2%
BR6OX2/CYP85A2
70
2.13%
F3'H/CYP75B
63
1.92%
STR
62
1.89%
SMT1/SMT2/SMT3
56
1.71%
RAS
50
1.52%
TRI/TRII
49
1.49%
CODM/T6ODM
49
1.49%
PYKS
49
1.49%
PMT
42
1.28%
CSE
41
1.25%
LAC
40
1.22%
HCT
36
1.1%
CYP71
36
1.1%
T16H
35
1.07%
IFR
35
1.07%
CAD
35
1.07%
H6H
33
1.01%
CYP90D1
33
1.01%
COMT
31
0.95%
SGD
28
0.85%
PAL
27
0.82%
CAS
27
0.82%
GS
25
0.76%
TPS
24
0.73%
SLS
23
0.7%
GES
22
0.67%
FNS
22
0.67%
G8O/G8H
21
0.64%
IO
21
0.64%
ANR
20
0.61%
CCR
20
0.61%
CHS
18
0.55%
16OMT
17
0.52%
BR6OX1/CYP85A1
17
0.52%
7DLH
16
0.49%
F3'5'H/CYP75A
16
0.49%
F5H/CYP84A
15
0.46%
COR
14
0.43%
CPD/CYP90A1
14
0.43%
CYP719
13
0.4%
LAMT
12
0.37%
NCS
12
0.37%
8HGO
10
0.3%
DFR
10
0.3%
CYP51G1
10
0.3%
BBE
9
0.27%
CCoAOMT
9
0.27%
CPR
9
0.27%
SQS/FDFT1
9
0.27%
SMO1/SMO2
9
0.27%
MVD
9
0.27%
GGPPS
9
0.27%
MPO
8
0.24%
AACT
8
0.24%
MVK
8
0.24%
CNMT
7
0.21%
ISY
7
0.21%
HPPR
7
0.21%
ADC
6
0.18%
CYP80B1
6
0.18%
TAT
6
0.18%
DWF7
6
0.18%
DET2
6
0.18%
FPPS
6
0.18%
DXS
6
0.18%
ANS/LDOX
5
0.15%
SQE
5
0.15%
HMGR
5
0.15%
TYDC_DDC
4
0.12%
TDC
4
0.12%
ROT3/CYP90C1
4
0.12%
DWF1
4
0.12%
IDI
4
0.12%
DXR
4
0.12%
CHI
3
0.09%
HYD1
3
0.09%
MCT/IspD
3
0.09%
HDR/IspH
3
0.09%
XMT_MXMT_DXMT
2
0.06%
CPI1
2
0.06%
MDS/IspF
2
0.06%
HMGS
2
0.06%
DWF5
1
0.03%
FK
1
0.03%
HDS/IspG
1
0.03%
CMK/IspE
1
0.03%
PMK
1
0.03%
GPPS
1
0.03%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 359 | 19 | BAHD (171) | View species results |
| Phenylpropanoid pathway | 347 | 11 | POD (164) | View species results |
| Alkaloid pathway | 297 | 20 | 7DLGT (38) | View species results |
| Flavonoid pathway | 155 | 8 | UFGT (81) | View species results |
| Rosmarinic acid pathway | 110 | 7 | C4H (34) | View species results |
| Steroid pathway | 88 | 11 | SMT1/SMT2/SMT3 (34) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 23 | 1174 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 303 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: SGD
| Gene | Pathway | Family | Confidence | Status |
|---|---|---|---|---|
| musa_beccarii_Mbe01_t004230.1 | Alkaloid | SGD | medium | pass |
| musa_beccarii_Mbe01_t008100.1 | Alkaloid | SGD | low | borderline |
| musa_beccarii_Mbe01_t011240.1 | Alkaloid | SGD | low | borderline |
| musa_beccarii_Mbe01_t011280.1 | Alkaloid | SGD | low | borderline |
| musa_beccarii_Mbe01_t042760.1 | Alkaloid | SGD | medium | pass |
| musa_beccarii_Mbe02_t004990.1 | Alkaloid | SGD | medium | pass |
| musa_beccarii_Mbe03_t020090.1 | Alkaloid | SGD | medium | pass |
| musa_beccarii_Mbe03_t020340.1 | Alkaloid | SGD | medium | pass |
| musa_beccarii_Mbe03_t021510.1 | Alkaloid | SGD | medium | pass |
| musa_beccarii_Mbe03_t021520.1 | Alkaloid | SGD | medium | pass |
| musa_beccarii_Mbe03_t021530.1 | Alkaloid | SGD | medium | pass |
| musa_beccarii_Mbe03_t066750.1 | Alkaloid | SGD | medium | pass |
| musa_beccarii_Mbe03_t066760.1 | Alkaloid | SGD | medium | pass |
| musa_beccarii_Mbe04_t001670.1 | Alkaloid | SGD | medium | pass |
| musa_beccarii_Mbe04_t041030.1 | Alkaloid | SGD | medium | pass |
| musa_beccarii_Mbe05_t013470.1 | Alkaloid | SGD | medium | pass |
| musa_beccarii_Mbe06_t006570.1 | Alkaloid | SGD | medium | pass |
| musa_beccarii_Mbe06_t006580.1 | Alkaloid | SGD | medium | pass |
| musa_beccarii_Mbe06_t020920.1 | Alkaloid | SGD | medium | pass |
| musa_beccarii_Mbe06_t029970.1 | Alkaloid | SGD | medium | pass |
| musa_beccarii_Mbe07_t015430.1 | Alkaloid | SGD | medium | pass |
| musa_beccarii_Mbe08_t009290.1 | Alkaloid | SGD | medium | pass |
| musa_beccarii_Mbe08_t016960.1 | Alkaloid | SGD | medium | pass |
| musa_beccarii_Mbe08_t027370.1 | Alkaloid | SGD | medium | pass |
| musa_beccarii_Mbe08_t028130.1 | Alkaloid | SGD | medium | pass |
| musa_beccarii_Mbe08_t033140.1 | Alkaloid | SGD | medium | pass |
| musa_beccarii_Mbe08_t037460.1 | Alkaloid | SGD | medium | pass |
| musa_beccarii_Mbe08_t037480.1 | Alkaloid | SGD | low | borderline |