PlantSME Plant secondary metabolism enzyme database

Nephelium lappaceum (nephelium_lappaceum)

Imported from atlas release summary for Nephelium lappaceum.

1377
Candidate Genes
101
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Algae
Site group 29
Bryophytes
Site group 125
Lycophytes/Ferns
Site group 4
Gymnosperms
Site group 6
Basal angiosperms
Site group 13
Monocots
Site group 117
Eudicots
Current group 495
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
Terpenoid pathway 30.14% Alkaloid pathway 21.28% Phenylpropanoid pathway 18.01% Flavonoid pathway 14.81% Rosmarinic acid pathway 10.02% Steroid pathway 5.74%
Family Distribution
C4H 7.19% C3'H/CYP98A 6.26% UGT 4.99% BAHD 4.83% 7DLGT 4.54% IFS 4.41% CYP76 4.38% UFGT 4.06%
Other Families 59.33%
More Families (93)
T3O 140 3.72% POD 113 3.0% 4CL 111 2.95% F3H 93 2.47% F3'H/CYP75B 92 2.44% BR6OX2/CYP85A2 89 2.36% DWF4/CYP90B1 84 2.23% CYP71 65 1.73% NMT 62 1.65% STR 61 1.62% CODM/T6ODM 59 1.57% CAS 51 1.35% CYP90D1 48 1.27% SMT1/SMT2/SMT3 48 1.27% CAD 44 1.17% LAC 44 1.17% TPS 44 1.17% GES 42 1.11% G8O/G8H 41 1.09% SGD 40 1.06% H6H 38 1.01% F5H/CYP84A 38 1.01% IFR 36 0.96% TRI/TRII 33 0.88% IO 32 0.85% HCT 31 0.82% T16H 30 0.8% BBE 30 0.8% RAS 28 0.74% PYKS 27 0.72% PMT 24 0.64% CSE 23 0.61% TAT 23 0.61% COMT 22 0.58% SLS 21 0.56% F3'5'H/CYP75A 20 0.53% FNS 20 0.53% CYP51G1 20 0.53% 7DLH 18 0.48% GS 17 0.45% CPD/CYP90A1 17 0.45% BR6OX1/CYP85A1 17 0.45% 16OMT 15 0.4% PAL 15 0.4% NCS 14 0.37% CCR 14 0.37% 8HGO 13 0.35% COR 12 0.32% ANR 12 0.32% DFR 12 0.32% CYP719 11 0.29% ANS/LDOX 11 0.29% ROT3/CYP90C1 11 0.29% CPR 10 0.27% LAMT 9 0.24% CYP80B1 9 0.24% HPPR 9 0.24% CNMT 8 0.21% ISY 7 0.19% MPO 6 0.16% CHS 6 0.16% DET2 6 0.16% GGPPS 6 0.16% FPPS 6 0.16% TYDC_DDC 5 0.13% DXS 5 0.13% AACT 5 0.13% CHI 4 0.11% CCoAOMT 4 0.11% SQS/FDFT1 4 0.11% SQE 4 0.11% MVD 4 0.11% HMGR 4 0.11% MCT/IspD 4 0.11% TDC 3 0.08% FLS 3 0.08% MVK 3 0.08% MDS/IspF 3 0.08% ODC 2 0.05% 6OMT_4OMT_SOMT 2 0.05% DWF7 2 0.05% SMO1/SMO2 2 0.05% DWF5 2 0.05% HMGS 2 0.05% CMK/IspE 2 0.05% XMT_MXMT_DXMT 1 0.03% ADC 1 0.03% FK 1 0.03% DWF1 1 0.03% HYD1 1 0.03% HDS/IspG 1 0.03% IDI 1 0.03% DXR 1 0.03%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 415 16 UGT (159) View species results
Alkaloid pathway 293 22 7DLGT (58) View species results
Phenylpropanoid pathway 248 11 POD (104) View species results
Flavonoid pathway 204 12 UFGT (134) View species results
Rosmarinic acid pathway 138 7 C4H (66) View species results
Steroid pathway 79 12 CAS (35) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 1641 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 241 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: DFR
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Gene Pathway Family Confidence Status Best Target
nephelium_lappaceum_GWHPBECQ004086 Flavonoid DFR low borderline DFR__00001__sp_Q500U8_TKPR1_ARATH
nephelium_lappaceum_GWHPBECQ006479 Flavonoid DFR medium borderline DFR__00001__sp_Q500U8_TKPR1_ARATH
nephelium_lappaceum_GWHPBECQ007204 Flavonoid DFR medium borderline DFR__00002__sp_Q84KP0_DFRA_PYRCO
nephelium_lappaceum_GWHPBECQ007218 Flavonoid DFR medium borderline DFR__00001__sp_Q500U8_TKPR1_ARATH
nephelium_lappaceum_GWHPBECQ007219 Flavonoid DFR medium borderline DFR__00001__sp_Q500U8_TKPR1_ARATH
nephelium_lappaceum_GWHPBECQ007544 Flavonoid DFR medium borderline DFR__00001__sp_Q500U8_TKPR1_ARATH
nephelium_lappaceum_GWHPBECQ010804 Flavonoid DFR medium borderline DFR__00002__sp_Q84KP0_DFRA_PYRCO
nephelium_lappaceum_GWHPBECQ012713 Flavonoid DFR medium borderline DFR__00001__sp_Q500U8_TKPR1_ARATH
nephelium_lappaceum_GWHPBECQ015069 Flavonoid DFR medium pass DFR__00002__sp_Q84KP0_DFRA_PYRCO
nephelium_lappaceum_GWHPBECQ015390 Flavonoid DFR medium borderline DFR__00003__sp_Q9XES5_DFRA_MALDO
nephelium_lappaceum_GWHPBECQ015393 Flavonoid DFR medium borderline DFR__00001__sp_Q500U8_TKPR1_ARATH
nephelium_lappaceum_GWHPBECQ019251 Flavonoid DFR low borderline DFR__00001__sp_Q500U8_TKPR1_ARATH