PlantSME Plant secondary metabolism enzyme database

Nephelium lappaceum (nephelium_lappaceum)

Imported from atlas release summary for Nephelium lappaceum.

1377
Candidate Genes
101
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Algae
Site group 29
Bryophytes
Site group 125
Lycophytes/Ferns
Site group 4
Gymnosperms
Site group 6
Basal angiosperms
Site group 13
Monocots
Site group 117
Eudicots
Current group 495
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
Terpenoid pathway 30.14% Alkaloid pathway 21.28% Phenylpropanoid pathway 18.01% Flavonoid pathway 14.81% Rosmarinic acid pathway 10.02% Steroid pathway 5.74%
Family Distribution
C4H 7.19% C3'H/CYP98A 6.26% UGT 4.99% BAHD 4.83% 7DLGT 4.54% IFS 4.41% CYP76 4.38% UFGT 4.06%
Other Families 59.33%
More Families (93)
T3O 140 3.72% POD 113 3.0% 4CL 111 2.95% F3H 93 2.47% F3'H/CYP75B 92 2.44% BR6OX2/CYP85A2 89 2.36% DWF4/CYP90B1 84 2.23% CYP71 65 1.73% NMT 62 1.65% STR 61 1.62% CODM/T6ODM 59 1.57% CAS 51 1.35% CYP90D1 48 1.27% SMT1/SMT2/SMT3 48 1.27% CAD 44 1.17% LAC 44 1.17% TPS 44 1.17% GES 42 1.11% G8O/G8H 41 1.09% SGD 40 1.06% H6H 38 1.01% F5H/CYP84A 38 1.01% IFR 36 0.96% TRI/TRII 33 0.88% IO 32 0.85% HCT 31 0.82% T16H 30 0.8% BBE 30 0.8% RAS 28 0.74% PYKS 27 0.72% PMT 24 0.64% CSE 23 0.61% TAT 23 0.61% COMT 22 0.58% SLS 21 0.56% F3'5'H/CYP75A 20 0.53% FNS 20 0.53% CYP51G1 20 0.53% 7DLH 18 0.48% GS 17 0.45% CPD/CYP90A1 17 0.45% BR6OX1/CYP85A1 17 0.45% 16OMT 15 0.4% PAL 15 0.4% NCS 14 0.37% CCR 14 0.37% 8HGO 13 0.35% COR 12 0.32% ANR 12 0.32% DFR 12 0.32% CYP719 11 0.29% ANS/LDOX 11 0.29% ROT3/CYP90C1 11 0.29% CPR 10 0.27% LAMT 9 0.24% CYP80B1 9 0.24% HPPR 9 0.24% CNMT 8 0.21% ISY 7 0.19% MPO 6 0.16% CHS 6 0.16% DET2 6 0.16% GGPPS 6 0.16% FPPS 6 0.16% TYDC_DDC 5 0.13% DXS 5 0.13% AACT 5 0.13% CHI 4 0.11% CCoAOMT 4 0.11% SQS/FDFT1 4 0.11% SQE 4 0.11% MVD 4 0.11% HMGR 4 0.11% MCT/IspD 4 0.11% TDC 3 0.08% FLS 3 0.08% MVK 3 0.08% MDS/IspF 3 0.08% ODC 2 0.05% 6OMT_4OMT_SOMT 2 0.05% DWF7 2 0.05% SMO1/SMO2 2 0.05% DWF5 2 0.05% HMGS 2 0.05% CMK/IspE 2 0.05% XMT_MXMT_DXMT 1 0.03% ADC 1 0.03% FK 1 0.03% DWF1 1 0.03% HYD1 1 0.03% HDS/IspG 1 0.03% IDI 1 0.03% DXR 1 0.03%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 415 16 UGT (159) View species results
Alkaloid pathway 293 22 7DLGT (58) View species results
Phenylpropanoid pathway 248 11 POD (104) View species results
Flavonoid pathway 204 12 UFGT (134) View species results
Rosmarinic acid pathway 138 7 C4H (66) View species results
Steroid pathway 79 12 CAS (35) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 1641 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 241 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: NMT
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Gene Pathway Family Confidence Status Best Target
nephelium_lappaceum_GWHPBECQ017575 Alkaloid NMT low borderline NMT__00056__sp_Q9FNE9_ATXR6_ARATH
nephelium_lappaceum_GWHPBECQ017765 Alkaloid NMT low borderline NMT__00009__sp_A0AA51VIL7_NMT1_LOPWI
nephelium_lappaceum_GWHPBECQ017866 Alkaloid NMT medium pass NMT__00042__sp_Q8GZB6_SUVH4_ARATH
nephelium_lappaceum_GWHPBECQ017871 Alkaloid NMT low borderline NMT__00033__sp_Q5QD03_SUVH3_CHLRE
nephelium_lappaceum_GWHPBECQ018051 Alkaloid NMT medium pass NMT__00066__sp_Q9SU94_ANM11_ARATH
nephelium_lappaceum_GWHPBECQ018797 Alkaloid NMT medium pass NMT__00060__sp_Q9MAT5_ANM10_ARATH
nephelium_lappaceum_GWHPBECQ019239 Alkaloid NMT medium pass NMT__00040__sp_Q84WW6_ASHH1_ARATH
nephelium_lappaceum_GWHPBECQ019539 Alkaloid NMT medium borderline NMT__00066__sp_Q9SU94_ANM11_ARATH
nephelium_lappaceum_GWHPBECQ019713 Alkaloid NMT medium pass NMT__00069__sp_Q9ZSM8_EZA1_ARATH
nephelium_lappaceum_GWHPBECQ019732 Alkaloid NMT low borderline NMT__00067__sp_Q9T0G7_SUVH9_ARATH
nephelium_lappaceum_GWHPBECQ020197 Alkaloid NMT medium pass NMT__00042__sp_Q8GZB6_SUVH4_ARATH
nephelium_lappaceum_GWHPBECQ020474 Alkaloid NMT medium pass NMT__00032__sp_Q5PP37_ATXR2_ARATH